EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0019335 (Gene tree)
Gene ID: -
Gene Symbol: Pum2
Alias: 5730503J23Rik|Kiaa0235|Pumm2
Full Name: pumilio RNA-binding family member 2
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Plus strand
Length: 88282 bases
Position: chr12:5782102-5870383
Accession: 1931751
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0034130	PUF	PF00806.19	1.4e-73	1	8
MGP_C3HHeJ_P0034130	PUF	PF00806.19	1.4e-73	2	8
MGP_C3HHeJ_P0034130	PUF	PF00806.19	1.4e-73	3	8
MGP_C3HHeJ_P0034130	PUF	PF00806.19	1.4e-73	4	8
MGP_C3HHeJ_P0034130	PUF	PF00806.19	1.4e-73	5	8
MGP_C3HHeJ_P0034130	PUF	PF00806.19	1.4e-73	6	8
MGP_C3HHeJ_P0034130	PUF	PF00806.19	1.4e-73	7	8
MGP_C3HHeJ_P0034130	PUF	PF00806.19	1.4e-73	8	8
MGP_C3HHeJ_P0034128	PUF	PF00806.19	1.5e-73	1	8
MGP_C3HHeJ_P0034128	PUF	PF00806.19	1.5e-73	2	8
MGP_C3HHeJ_P0034128	PUF	PF00806.19	1.5e-73	3	8
MGP_C3HHeJ_P0034128	PUF	PF00806.19	1.5e-73	4	8
MGP_C3HHeJ_P0034128	PUF	PF00806.19	1.5e-73	5	8
MGP_C3HHeJ_P0034128	PUF	PF00806.19	1.5e-73	6	8
MGP_C3HHeJ_P0034128	PUF	PF00806.19	1.5e-73	7	8
MGP_C3HHeJ_P0034128	PUF	PF00806.19	1.5e-73	8	8
MGP_C3HHeJ_P0034136	PUF	PF00806.19	1.5e-73	1	8
MGP_C3HHeJ_P0034136	PUF	PF00806.19	1.5e-73	2	8
MGP_C3HHeJ_P0034136	PUF	PF00806.19	1.5e-73	3	8
MGP_C3HHeJ_P0034136	PUF	PF00806.19	1.5e-73	4	8
MGP_C3HHeJ_P0034136	PUF	PF00806.19	1.5e-73	5	8
MGP_C3HHeJ_P0034136	PUF	PF00806.19	1.5e-73	6	8
MGP_C3HHeJ_P0034136	PUF	PF00806.19	1.5e-73	7	8
MGP_C3HHeJ_P0034136	PUF	PF00806.19	1.5e-73	8	8
MGP_C3HHeJ_P0034129	PUF	PF00806.19	3.1e-73	1	8
MGP_C3HHeJ_P0034129	PUF	PF00806.19	3.1e-73	2	8
MGP_C3HHeJ_P0034129	PUF	PF00806.19	3.1e-73	3	8
MGP_C3HHeJ_P0034129	PUF	PF00806.19	3.1e-73	4	8
MGP_C3HHeJ_P0034129	PUF	PF00806.19	3.1e-73	5	8
MGP_C3HHeJ_P0034129	PUF	PF00806.19	3.1e-73	6	8
MGP_C3HHeJ_P0034129	PUF	PF00806.19	3.1e-73	7	8
MGP_C3HHeJ_P0034129	PUF	PF00806.19	3.1e-73	8	8
MGP_C3HHeJ_P0034131	PUF	PF00806.19	3.1e-73	1	8
MGP_C3HHeJ_P0034131	PUF	PF00806.19	3.1e-73	2	8
MGP_C3HHeJ_P0034131	PUF	PF00806.19	3.1e-73	3	8
MGP_C3HHeJ_P0034131	PUF	PF00806.19	3.1e-73	4	8
MGP_C3HHeJ_P0034131	PUF	PF00806.19	3.1e-73	5	8
MGP_C3HHeJ_P0034131	PUF	PF00806.19	3.1e-73	6	8
MGP_C3HHeJ_P0034131	PUF	PF00806.19	3.1e-73	7	8
MGP_C3HHeJ_P0034131	PUF	PF00806.19	3.1e-73	8	8
MGP_C3HHeJ_P0034135	PUF	PF00806.19	1.4e-72	1	8
MGP_C3HHeJ_P0034135	PUF	PF00806.19	1.4e-72	2	8
MGP_C3HHeJ_P0034135	PUF	PF00806.19	1.4e-72	3	8
MGP_C3HHeJ_P0034135	PUF	PF00806.19	1.4e-72	4	8
MGP_C3HHeJ_P0034135	PUF	PF00806.19	1.4e-72	5	8
MGP_C3HHeJ_P0034135	PUF	PF00806.19	1.4e-72	6	8
MGP_C3HHeJ_P0034135	PUF	PF00806.19	1.4e-72	7	8
MGP_C3HHeJ_P0034135	PUF	PF00806.19	1.4e-72	8	8
MGP_C3HHeJ_P0034137	PUF	PF00806.19	1.4e-72	1	8
MGP_C3HHeJ_P0034137	PUF	PF00806.19	1.4e-72	2	8
MGP_C3HHeJ_P0034137	PUF	PF00806.19	1.4e-72	3	8
MGP_C3HHeJ_P0034137	PUF	PF00806.19	1.4e-72	4	8
MGP_C3HHeJ_P0034137	PUF	PF00806.19	1.4e-72	5	8
MGP_C3HHeJ_P0034137	PUF	PF00806.19	1.4e-72	6	8
MGP_C3HHeJ_P0034137	PUF	PF00806.19	1.4e-72	7	8
MGP_C3HHeJ_P0034137	PUF	PF00806.19	1.4e-72	8	8
MGP_C3HHeJ_P0034143	PUF	PF00806.19	4.1e-40	1	4
MGP_C3HHeJ_P0034143	PUF	PF00806.19	4.1e-40	2	4
MGP_C3HHeJ_P0034143	PUF	PF00806.19	4.1e-40	3	4
MGP_C3HHeJ_P0034143	PUF	PF00806.19	4.1e-40	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0034142	-	706	-	MGP_C3HHeJ_P0034142	234 (aa)	-	-
MGP_C3HHeJ_T0034144	-	612	-	-	- (aa)	-	-
MGP_C3HHeJ_T0034143	-	665	-	MGP_C3HHeJ_P0034143	221 (aa)	-	-
MGP_C3HHeJ_T0034141	-	994	-	MGP_C3HHeJ_P0034141	35 (aa)	-	-
MGP_C3HHeJ_T0034140	-	472	-	MGP_C3HHeJ_P0034140	109 (aa)	-	-
MGP_C3HHeJ_T0034137	-	6226	-	MGP_C3HHeJ_P0034137	1066 (aa)	-	-
MGP_C3HHeJ_T0034136	-	3295	-	MGP_C3HHeJ_P0034136	985 (aa)	-	-
MGP_C3HHeJ_T0034135	-	3560	-	MGP_C3HHeJ_P0034135	1066 (aa)	-	-
MGP_C3HHeJ_T0034134	-	6313	-	MGP_C3HHeJ_P0034134	1008 (aa)	-	-
MGP_C3HHeJ_T0034133	-	6218	-	MGP_C3HHeJ_P0034133	35 (aa)	-	-
MGP_C3HHeJ_T0034132	-	518	-	-	- (aa)	-	-
MGP_C3HHeJ_T0034131	-	6311	-	MGP_C3HHeJ_P0034131	1064 (aa)	-	-
MGP_C3HHeJ_T0034130	-	3587	-	MGP_C3HHeJ_P0034130	980 (aa)	-	-
MGP_C3HHeJ_T0034128	-	5874	XM_006515277	MGP_C3HHeJ_P0034128	985 (aa)	XP_006515340	Q80U58
MGP_C3HHeJ_T0034129	-	4984	-	MGP_C3HHeJ_P0034129	1064 (aa)	-	-
MGP_C3HHeJ_T0034139	-	648	-	MGP_C3HHeJ_P0034139	185 (aa)	-	-
MGP_C3HHeJ_T0034138	-	902	-	MGP_C3HHeJ_P0034138	262 (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0019335's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0019335	Pum2	100	88.835	MGP_C3HHeJ_G0028549	Pum1	86	87.294