EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0019638 (Gene tree)
Gene ID: -
Gene Symbol: Srsf5
Alias: Hrs|Sfrs5
Full Name: serine/arginine-rich splicing factor 5
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Plus strand
Length: 5105 bases
Position: chr12:81002643-81007747
Accession: 98287
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0034939	RRM_1	PF00076.22	1.7e-30	1	2
MGP_C3HHeJ_P0034939	RRM_1	PF00076.22	1.7e-30	2	2
MGP_C3HHeJ_P0034944	RRM_1	PF00076.22	1.7e-30	1	2
MGP_C3HHeJ_P0034944	RRM_1	PF00076.22	1.7e-30	2	2
MGP_C3HHeJ_P0034949	RRM_1	PF00076.22	1.7e-30	1	2
MGP_C3HHeJ_P0034949	RRM_1	PF00076.22	1.7e-30	2	2
MGP_C3HHeJ_P0034941	RRM_1	PF00076.22	1.7e-30	1	2
MGP_C3HHeJ_P0034941	RRM_1	PF00076.22	1.7e-30	2	2
MGP_C3HHeJ_P0034943	RRM_1	PF00076.22	1.7e-30	1	2
MGP_C3HHeJ_P0034943	RRM_1	PF00076.22	1.7e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0034948	-	490	-	-	- (aa)	-	-
MGP_C3HHeJ_T0034949	-	1568	-	MGP_C3HHeJ_P0034949	269 (aa)	-	-
MGP_C3HHeJ_T0034950	-	3483	-	-	- (aa)	-	-
MGP_C3HHeJ_T0034939	-	1527	XM_006515629	MGP_C3HHeJ_P0034939	269 (aa)	XP_006515692	O35326
MGP_C3HHeJ_T0034942	-	2720	-	-	- (aa)	-	-
MGP_C3HHeJ_T0034943	-	1498	-	MGP_C3HHeJ_P0034943	270 (aa)	-	-
MGP_C3HHeJ_T0034940	-	2940	-	-	- (aa)	-	-
MGP_C3HHeJ_T0034941	-	1510	-	MGP_C3HHeJ_P0034941	270 (aa)	-	-
MGP_C3HHeJ_T0034946	-	886	-	-	- (aa)	-	-
MGP_C3HHeJ_T0034947	-	547	-	MGP_C3HHeJ_P0034947	46 (aa)	-	-
MGP_C3HHeJ_T0034944	-	1491	-	MGP_C3HHeJ_P0034944	269 (aa)	-	-
MGP_C3HHeJ_T0034945	-	538	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C3HHeJ_G0019638's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0019638's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0019638	Srsf5	96	51.020	MGP_C3HHeJ_G0018674	Srsf1	80	46.988
MGP_C3HHeJ_G0019638	Srsf5	89	48.780	MGP_C3HHeJ_G0029660	Srsf9	68	39.394
MGP_C3HHeJ_G0019638	Srsf5	89	63.415	MGP_C3HHeJ_G0026530	Srsf6	50	71.642