EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0019889 (Gene tree)
Gene ID: -
Gene Symbol: Tdrd9
Alias: 4930441E05Rik
Full Name: tudor domain containing 9
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Plus strand
Length: 95600 bases
Position: chr12:113659088-113754687
Accession: 1921941
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0035752	TUDOR	PF00567.24	6.8e-15	1	1
MGP_C3HHeJ_P0035752	DEAD	PF00270.29	1.3e-07	1	1
MGP_C3HHeJ_P0035752	HA2	PF04408.23	2.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0035761	-	3366	-	MGP_C3HHeJ_P0035761	539 (aa)	-	-
MGP_C3HHeJ_T0035760	-	3681	-	MGP_C3HHeJ_P0035760	216 (aa)	-	-
MGP_C3HHeJ_T0035763	-	456	-	-	- (aa)	-	-
MGP_C3HHeJ_T0035762	-	799	-	-	- (aa)	-	-
MGP_C3HHeJ_T0035764	-	486	-	-	- (aa)	-	-
MGP_C3HHeJ_T0035759	-	3786	-	MGP_C3HHeJ_P0035759	1261 (aa)	-	-
MGP_C3HHeJ_T0035752	-	4813	XM_006516316	MGP_C3HHeJ_P0035752	1383 (aa)	XP_006516379	Q14BI7
MGP_C3HHeJ_T0035753	-	4098	-	MGP_C3HHeJ_P0035753	1365 (aa)	-	-

Gene Model

Click here to download MGP_C3HHeJ_G0019889's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0019889's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0019889	Tdrd9	95	32.448	MGP_C3HHeJ_G0018374	Dhx33	77	31.000
MGP_C3HHeJ_G0019889	Tdrd9	99	34.251	MGP_C3HHeJ_G0026975	Dhx36	57	34.338
MGP_C3HHeJ_G0019889	Tdrd9	89	31.417	MGP_C3HHeJ_G0018649	Dhx40	66	31.059
MGP_C3HHeJ_G0019889	Tdrd9	95	33.843	MGP_C3HHeJ_G0035025	Dhx30	51	32.248
MGP_C3HHeJ_G0019889	Tdrd9	88	30.081	MGP_C3HHeJ_G0029243	Dhx15	71	30.081