EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0020023 (Gene tree)
Gene ID: -
Gene Symbol: Zkscan4
Alias: AI841875|Gm11272|OTTMUSG00000000421
Full Name: zinc finger with KRAB and SCAN domains 4
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Plus strand
Length: 6561 bases
Position: chr13:18731091-18737651
Accession: 3649412
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0036121	zf-C2H2	PF00096.26	8.7e-41	1	7
MGP_C3HHeJ_P0036121	zf-C2H2	PF00096.26	8.7e-41	2	7
MGP_C3HHeJ_P0036121	zf-C2H2	PF00096.26	8.7e-41	3	7
MGP_C3HHeJ_P0036121	zf-C2H2	PF00096.26	8.7e-41	4	7
MGP_C3HHeJ_P0036121	zf-C2H2	PF00096.26	8.7e-41	5	7
MGP_C3HHeJ_P0036121	zf-C2H2	PF00096.26	8.7e-41	6	7
MGP_C3HHeJ_P0036121	zf-C2H2	PF00096.26	8.7e-41	7	7
MGP_C3HHeJ_P0036121	zf-met	PF12874.7	1.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0036121	-	2398	-	MGP_C3HHeJ_P0036121	477 (aa)	-	Q5SZT6

Gene Model

Click here to download MGP_C3HHeJ_G0020023's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0020023's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0020023	Zkscan4	53	47.826	MGP_C3HHeJ_G0030900	Prdm5	78	47.826
MGP_C3HHeJ_G0020023	Zkscan4	52	47.674	MGP_C3HHeJ_G0024336	Zfp236	61	47.674
MGP_C3HHeJ_G0020023	Zkscan4	53	37.561	MGP_C3HHeJ_G0026648	Zfp64	70	37.561
MGP_C3HHeJ_G0020023	Zkscan4	54	61.184	MGP_C3HHeJ_G0031693	Zfp420	99	50.909
MGP_C3HHeJ_G0020023	Zkscan4	56	46.457	MGP_C3HHeJ_G0020445	Rslcan18	74	45.455
MGP_C3HHeJ_G0020023	Zkscan4	54	49.091	MGP_C3HHeJ_G0020446	Zfp759	88	45.622
MGP_C3HHeJ_G0020023	Zkscan4	53	52.381	MGP_C3HHeJ_G0031558	Zfp574	66	49.057
MGP_C3HHeJ_G0020023	Zkscan4	63	48.408	MGP_C3HHeJ_G0022976	Zfp945	92	46.330
MGP_C3HHeJ_G0020023	Zkscan4	53	54.491	MGP_C3HHeJ_G0033828	Zfp1	75	54.491
MGP_C3HHeJ_G0020023	Zkscan4	50	41.518	MGP_C3HHeJ_G0028746	Zbtb17	56	41.518
MGP_C3HHeJ_G0020023	Zkscan4	95	49.664	MGP_C3HHeJ_G0022983	Zscan10	98	43.564
MGP_C3HHeJ_G0020023	Zkscan4	54	47.032	MGP_C3HHeJ_G0033454	Zfp882	85	47.032
MGP_C3HHeJ_G0020023	Zkscan4	67	53.289	MGP_C3HHeJ_G0022955	Zfp51	99	53.289
MGP_C3HHeJ_G0020023	Zkscan4	58	46.296	MGP_C3HHeJ_G0031279	Zfp865	78	36.199
MGP_C3HHeJ_G0020023	Zkscan4	53	37.229	MGP_C3HHeJ_G0033668	Zfp319	87	37.229
MGP_C3HHeJ_G0020023	Zkscan4	53	45.852	MGP_C3HHeJ_G0018101	Zfp672	100	41.975
MGP_C3HHeJ_G0020023	Zkscan4	50	45.833	MGP_C3HHeJ_G0018152	Zfp867	77	45.833
MGP_C3HHeJ_G0020023	Zkscan4	52	53.535	MGP_C3HHeJ_G0018006	Zfp454	70	53.535
MGP_C3HHeJ_G0020023	Zkscan4	64	55.435	MGP_C3HHeJ_G0026182	Zfp661	76	55.435
MGP_C3HHeJ_G0020023	Zkscan4	50	52.414	MGP_C3HHeJ_G0026610	Zfp334	65	52.414
MGP_C3HHeJ_G0020023	Zkscan4	54	43.363	MGP_C3HHeJ_G0032732	E430018J23Rik	59	41.667
MGP_C3HHeJ_G0020023	Zkscan4	54	45.133	MGP_C3HHeJ_G0031823	Zfp715	71	45.133
MGP_C3HHeJ_G0020023	Zkscan4	50	48.372	MGP_C3HHeJ_G0030551	Zfp637	71	48.372
MGP_C3HHeJ_G0020023	Zkscan4	65	47.845	MGP_C3HHeJ_G0031521	Zfp112	56	48.085
MGP_C3HHeJ_G0020023	Zkscan4	65	51.938	MGP_C3HHeJ_G0031522	Zfp235	62	51.938
MGP_C3HHeJ_G0020023	Zkscan4	53	52.000	MGP_C3HHeJ_G0031526	Zfp108	66	52.000
MGP_C3HHeJ_G0020023	Zkscan4	61	46.023	MGP_C3HHeJ_G0031528	Zfp94	72	47.137
MGP_C3HHeJ_G0020023	Zkscan4	70	45.455	MGP_C3HHeJ_G0022953	Zfp677	89	45.455
MGP_C3HHeJ_G0020023	Zkscan4	53	49.286	MGP_C3HHeJ_G0031527	Zfp61	58	49.286
MGP_C3HHeJ_G0020023	Zkscan4	51	51.695	MGP_C3HHeJ_G0021752	Zfp251	73	48.498
MGP_C3HHeJ_G0020023	Zkscan4	50	44.595	MGP_C3HHeJ_G0031632	Zfp974	88	44.595
MGP_C3HHeJ_G0020023	Zkscan4	53	50.424	MGP_C3HHeJ_G0031815	-	55	50.424
MGP_C3HHeJ_G0020023	Zkscan4	54	47.857	MGP_C3HHeJ_G0030394	Repin1	95	47.857
MGP_C3HHeJ_G0020023	Zkscan4	50	49.057	MGP_C3HHeJ_G0032730	Zfp768	52	52.632
MGP_C3HHeJ_G0020023	Zkscan4	54	44.248	MGP_C3HHeJ_G0032733	-	74	44.248
MGP_C3HHeJ_G0020023	Zkscan4	51	45.342	MGP_C3HHeJ_G0029207	Zbtb49	66	47.222
MGP_C3HHeJ_G0020023	Zkscan4	60	46.099	MGP_C3HHeJ_G0018339	Bcl6b	51	46.099