EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0020382 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpk
Alias: Hnrpk|Hnrpk {ECO:0000313|EMBL:AAH89328.1,GN ECO:0000313|MGI:MGI:99894}|KBBP|NOVA|hnRNPK
Full Name: heterogeneous nuclear ribonucleoprotein K
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Minus strand
Length: 13492 bases
Position: chr13:57346622-57360113
Accession: 99894
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0036995	KH_1	PF00013.29	2.5e-43	1	3
MGP_C3HHeJ_P0036995	KH_1	PF00013.29	2.5e-43	2	3
MGP_C3HHeJ_P0036995	KH_1	PF00013.29	2.5e-43	3	3
MGP_C3HHeJ_P0036998	KH_1	PF00013.29	2.5e-43	1	3
MGP_C3HHeJ_P0036998	KH_1	PF00013.29	2.5e-43	2	3
MGP_C3HHeJ_P0036998	KH_1	PF00013.29	2.5e-43	3	3
MGP_C3HHeJ_P0036994	KH_1	PF00013.29	3.2e-43	1	3
MGP_C3HHeJ_P0036994	KH_1	PF00013.29	3.2e-43	2	3
MGP_C3HHeJ_P0036994	KH_1	PF00013.29	3.2e-43	3	3
MGP_C3HHeJ_P0036997	KH_1	PF00013.29	3.2e-43	1	3
MGP_C3HHeJ_P0036997	KH_1	PF00013.29	3.2e-43	2	3
MGP_C3HHeJ_P0036997	KH_1	PF00013.29	3.2e-43	3	3
MGP_C3HHeJ_P0036996	KH_1	PF00013.29	2.3e-33	1	2
MGP_C3HHeJ_P0036996	KH_1	PF00013.29	2.3e-33	2	2
MGP_C3HHeJ_P0037003	KH_1	PF00013.29	1.1e-23	1	2
MGP_C3HHeJ_P0037003	KH_1	PF00013.29	1.1e-23	2	2
MGP_C3HHeJ_P0037000	KH_1	PF00013.29	1.5e-23	1	2
MGP_C3HHeJ_P0037000	KH_1	PF00013.29	1.5e-23	2	2
MGP_C3HHeJ_P0037006	KH_1	PF00013.29	2.7e-23	1	2
MGP_C3HHeJ_P0037006	KH_1	PF00013.29	2.7e-23	2	2
MGP_C3HHeJ_P0037008	KH_1	PF00013.29	3.2e-09	1	1
MGP_C3HHeJ_P0037010	KH_1	PF00013.29	6.1e-09	1	1
MGP_C3HHeJ_P0037005	KH_1	PF00013.29	3.2e-05	1	1
MGP_C3HHeJ_P0037010	KH_2	PF07650.17	0.0001	1	1
MGP_C3HHeJ_P0037005	KH_2	PF07650.17	0.00022	1	1
MGP_C3HHeJ_P0037010	KH_4	PF13083.6	4e-07	1	1
MGP_C3HHeJ_P0037005	ROKNT	PF08067.11	7.3e-26	1	1
MGP_C3HHeJ_P0037000	ROKNT	PF08067.11	1.1e-25	1	1
MGP_C3HHeJ_P0037010	ROKNT	PF08067.11	1.3e-25	1	1
MGP_C3HHeJ_P0037003	ROKNT	PF08067.11	6.9e-25	1	1
MGP_C3HHeJ_P0036995	ROKNT	PF08067.11	4.5e-24	1	1
MGP_C3HHeJ_P0036998	ROKNT	PF08067.11	4.5e-24	1	1
MGP_C3HHeJ_P0036994	ROKNT	PF08067.11	2.3e-23	1	1
MGP_C3HHeJ_P0036997	ROKNT	PF08067.11	2.3e-23	1	1
MGP_C3HHeJ_P0037006	ROKNT	PF08067.11	6.3e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0037006	-	640	-	MGP_C3HHeJ_P0037006	175 (aa)	-	-
MGP_C3HHeJ_T0037007	-	833	-	-	- (aa)	-	-
MGP_C3HHeJ_T0037004	-	459	-	-	- (aa)	-	-
MGP_C3HHeJ_T0037005	-	687	-	MGP_C3HHeJ_P0037005	74 (aa)	-	-
MGP_C3HHeJ_T0037002	-	737	-	-	- (aa)	-	-
MGP_C3HHeJ_T0037003	-	864	-	MGP_C3HHeJ_P0037003	253 (aa)	-	-
MGP_C3HHeJ_T0037000	-	968	-	MGP_C3HHeJ_P0037000	296 (aa)	-	-
MGP_C3HHeJ_T0037001	-	522	-	-	- (aa)	-	-
MGP_C3HHeJ_T0037011	-	744	-	-	- (aa)	-	-
MGP_C3HHeJ_T0037008	-	476	-	MGP_C3HHeJ_P0037008	87 (aa)	-	-
MGP_C3HHeJ_T0037009	-	739	-	-	- (aa)	-	-
MGP_C3HHeJ_T0036997	-	2804	-	MGP_C3HHeJ_P0036997	471 (aa)	-	-
MGP_C3HHeJ_T0036996	-	2692	-	MGP_C3HHeJ_P0036996	395 (aa)	-	-
MGP_C3HHeJ_T0036995	-	2694	-	MGP_C3HHeJ_P0036995	447 (aa)	-	-
MGP_C3HHeJ_T0036994	-	3038	XM_006517103	MGP_C3HHeJ_P0036994	471 (aa)	XP_006517166	P61979
MGP_C3HHeJ_T0037010	-	1017	-	MGP_C3HHeJ_P0037010	94 (aa)	-	-
MGP_C3HHeJ_T0036999	-	1208	-	-	- (aa)	-	-
MGP_C3HHeJ_T0036998	-	2781	-	MGP_C3HHeJ_P0036998	447 (aa)	-	-

Gene Model

Click here to download MGP_C3HHeJ_G0020382's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0020382's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0020382	Hnrnpk	93	98.729	MGP_C3HHeJ_G0032156	-	97	99.149
MGP_C3HHeJ_G0020382	Hnrnpk	79	31.724	MGP_C3HHeJ_G0030753	Pcbp1	85	42.857
MGP_C3HHeJ_G0020382	Hnrnpk	56	37.681	MGP_C3HHeJ_G0031452	-	54	37.681
MGP_C3HHeJ_G0020382	Hnrnpk	79	32.414	MGP_C3HHeJ_G0034915	-	86	33.728
MGP_C3HHeJ_G0020382	Hnrnpk	79	31.724	MGP_C3HHeJ_G0022148	Pcbp2	84	44.444
MGP_C3HHeJ_G0020382	Hnrnpk	56	34.615	MGP_C3HHeJ_G0027689	Fubp1	53	34.615
MGP_C3HHeJ_G0020382	Hnrnpk	55	39.062	MGP_C3HHeJ_G0019460	Nova1	56	39.062
MGP_C3HHeJ_G0020382	Hnrnpk	79	31.724	MGP_C3HHeJ_G0017151	Pcbp3	79	41.667