EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0020677 (Gene tree)
Gene ID: -
Gene Symbol: Ddx4
Alias: AV206478|Mvh|VASA|Vasa|mvh / m'vasa
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Minus strand
Length: 54952 bases
Position: chr13:113705208-113760159
Accession: 102670
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0037894	DEAD	PF00270.29	4.5e-49	1	1
MGP_C3HHeJ_P0037895	DEAD	PF00270.29	4.9e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0037895	-	2848	-	MGP_C3HHeJ_P0037895	728 (aa)	-	-
MGP_C3HHeJ_T0037894	-	2770	XM_006517524	MGP_C3HHeJ_P0037894	702 (aa)	XP_006517587	Q61496

Gene Model

Click here to download MGP_C3HHeJ_G0020677's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0020677's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0020677	Ddx4	67	50.513	MGP_C3HHeJ_G0035258	Ddx3x	69	51.528
MGP_C3HHeJ_G0020677	Ddx4	56	34.271	MGP_C3HHeJ_G0031116	Ddx47	93	33.760
MGP_C3HHeJ_G0020677	Ddx4	62	52.596	MGP_C3HHeJ_G0016682	D1Pas1	71	49.578
MGP_C3HHeJ_G0020677	Ddx4	53	38.684	MGP_C3HHeJ_G0016310	Ddx59	59	38.684
MGP_C3HHeJ_G0020677	Ddx4	57	38.519	MGP_C3HHeJ_G0020351	Ddx41	64	38.519
MGP_C3HHeJ_G0020677	Ddx4	52	33.687	MGP_C3HHeJ_G0033388	Ddx49	95	33.616
MGP_C3HHeJ_G0020677	Ddx4	56	40.000	MGP_C3HHeJ_G0034749	Ddx43	60	40.000
MGP_C3HHeJ_G0020677	Ddx4	57	34.069	MGP_C3HHeJ_G0018617	Ddx52	66	34.069
MGP_C3HHeJ_G0020677	Ddx4	52	40.214	MGP_C3HHeJ_G0019064	Ddx5	80	38.922
MGP_C3HHeJ_G0020677	Ddx4	57	39.163	MGP_C3HHeJ_G0021815	Ddx17	61	39.163
MGP_C3HHeJ_G0020677	Ddx4	56	30.691	MGP_C3HHeJ_G0019227	Eif4a3	90	30.691
MGP_C3HHeJ_G0020677	Ddx4	54	30.326	MGP_C3HHeJ_G0034217	Ddx25	80	30.488