EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_C3HHeJ_G0021827 (Gene tree)
Gene ID
-
Gene Symbol
Apobec3
Alias
APOBEC3|Apobec|Arp3|BC003314|CEM15|Cem15|Gm20117|Rfv-3|Rfv3
Full Name
apolipoprotein B mRNA editing enzyme%2C catalytic polypeptide 3
Gene Type
protein_coding
Species
Mus_musculus_c3hhej
Status
putative
Strand
Plus strand
Length
23919 bases
Position
chr15:79565558-79589476
Accession
1933111
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_C3HHeJ_P0041457APOBEC_NPF08210.112.6e-7912
MGP_C3HHeJ_P0041457APOBEC_NPF08210.112.6e-7922
MGP_C3HHeJ_P0041454APOBEC_NPF08210.113.3e-7912
MGP_C3HHeJ_P0041454APOBEC_NPF08210.113.3e-7922
MGP_C3HHeJ_P0041458APOBEC_NPF08210.113.3e-7912
MGP_C3HHeJ_P0041458APOBEC_NPF08210.113.3e-7922
MGP_C3HHeJ_P0041460APOBEC_NPF08210.113.6e-7912
MGP_C3HHeJ_P0041460APOBEC_NPF08210.113.6e-7922
MGP_C3HHeJ_P0041452APOBEC_NPF08210.112.6e-2611
MGP_C3HHeJ_P0041451APOBEC_NPF08210.117.6e-2611
MGP_C3HHeJ_P0041461APOBEC_NPF08210.118.7e-2411
MGP_C3HHeJ_P0041457APOBEC_CPF05240.147.7e-5412
MGP_C3HHeJ_P0041457APOBEC_CPF05240.147.7e-5422
MGP_C3HHeJ_P0041454APOBEC_CPF05240.141.2e-5312
MGP_C3HHeJ_P0041454APOBEC_CPF05240.141.2e-5322
MGP_C3HHeJ_P0041458APOBEC_CPF05240.141.3e-5312
MGP_C3HHeJ_P0041458APOBEC_CPF05240.141.3e-5322
MGP_C3HHeJ_P0041460APOBEC_CPF05240.141.5e-5312
MGP_C3HHeJ_P0041460APOBEC_CPF05240.141.5e-5322
MGP_C3HHeJ_P0041451APOBEC_CPF05240.144.4e-2811
MGP_C3HHeJ_P0041452APOBEC_CPF05240.145.2e-2811
MGP_C3HHeJ_P0041461APOBEC_CPF05240.141.7e-2411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_C3HHeJ_T0041458-2780-MGP_C3HHeJ_P0041458430 (aa)--
MGP_C3HHeJ_T0041459-2246-MGP_C3HHeJ_P0041459392 (aa)--
MGP_C3HHeJ_T0041454-2460-MGP_C3HHeJ_P0041454429 (aa)--
MGP_C3HHeJ_T0041455-699-MGP_C3HHeJ_P004145579 (aa)--
MGP_C3HHeJ_T0041456-1217-MGP_C3HHeJ_P004145646 (aa)--
MGP_C3HHeJ_T0041457-1980-MGP_C3HHeJ_P0041457407 (aa)--
MGP_C3HHeJ_T0041451-750XM_006521551MGP_C3HHeJ_P0041451166 (aa)XP_006521614Q99J72
MGP_C3HHeJ_T0041452-817-MGP_C3HHeJ_P0041452151 (aa)--
MGP_C3HHeJ_T0041453-607--- (aa)--
MGP_C3HHeJ_T0041461-648-MGP_C3HHeJ_P004146185 (aa)--
MGP_C3HHeJ_T0041460-1323-MGP_C3HHeJ_P0041460440 (aa)--
MGP_C3HHeJ_T0041463-2082--- (aa)--
MGP_C3HHeJ_T0041462-731--- (aa)--
MGP_C3HHeJ_T0041464-720--- (aa)--
Gene Model
Click here to download MGP_C3HHeJ_G0021827's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0021827's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_C3HHeJ_G0021827Apobec39833.721MGP_C3HHeJ_G0023598Apobec27833.333
MGP_C3HHeJ_G0021827Apobec39642.169MGP_C3HHeJ_G0030925Aicda9139.344
MGP_C3HHeJ_G0021827Apobec38438.028MGP_C3HHeJ_G0030926Apobec17434.737

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