EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0022038 (Gene tree)
Gene ID: -
Gene Symbol: Ddx23
Alias: 3110082M05Rik|4921506D17Rik
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 23
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Minus strand
Length: 20306 bases
Position: chr15:99438134-99458439
Accession: 1921601
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0042159	DEAD	PF00270.29	2.3e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0042164	-	610	-	-	- (aa)	-	-
MGP_C3HHeJ_T0042161	-	3403	-	-	- (aa)	-	-
MGP_C3HHeJ_T0042160	-	3085	-	-	- (aa)	-	-
MGP_C3HHeJ_T0042163	-	321	-	MGP_C3HHeJ_P0042163	80 (aa)	-	-
MGP_C3HHeJ_T0042162	-	786	-	-	- (aa)	-	-
MGP_C3HHeJ_T0042159	-	3163	XM_006521493	MGP_C3HHeJ_P0042159	819 (aa)	XP_006521556	D3Z0M9

Gene Model

Click here to download MGP_C3HHeJ_G0022038's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0022038's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0022038	Ddx23	50	30.900	MGP_C3HHeJ_G0022409	Eif4a2	92	30.900
MGP_C3HHeJ_G0022038	Ddx23	53	38.063	MGP_C3HHeJ_G0016682	D1Pas1	63	38.063
MGP_C3HHeJ_G0022038	Ddx23	54	30.243	MGP_C3HHeJ_G0018617	Ddx52	70	30.222
MGP_C3HHeJ_G0022038	Ddx23	54	40.757	MGP_C3HHeJ_G0034749	Ddx43	63	40.757
MGP_C3HHeJ_G0022038	Ddx23	52	37.868	MGP_C3HHeJ_G0035258	Ddx3x	63	37.753
MGP_C3HHeJ_G0022038	Ddx23	52	40.139	MGP_C3HHeJ_G0020351	Ddx41	75	37.400
MGP_C3HHeJ_G0022038	Ddx23	51	39.110	MGP_C3HHeJ_G0021815	Ddx17	60	39.110
MGP_C3HHeJ_G0022038	Ddx23	52	35.417	MGP_C3HHeJ_G0016310	Ddx59	64	35.417