EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_C3HHeJ_G0022841 (Gene tree)
Gene ID
-
Gene Symbol
Synj2
Alias
AI481647|Kiaa0348|SJ2|mKIAA0348
Full Name
synaptojanin 2
Gene Type
protein_coding
Species
Mus_musculus_c3hhej
Status
putative
Strand
Plus strand
Length
108045 bases
Position
chr17:3133710-3241754
Accession
1201671
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_C3HHeJ_P0045118Exo_endo_phosPF03372.234.4e-1411
MGP_C3HHeJ_P0045128Exo_endo_phosPF03372.234.6e-1411
MGP_C3HHeJ_P0045125Exo_endo_phosPF03372.236.7e-1411
MGP_C3HHeJ_P0045122Exo_endo_phosPF03372.238.9e-1411
MGP_C3HHeJ_P0045119Exo_endo_phosPF03372.231.2e-1311
MGP_C3HHeJ_P0045114Exo_endo_phosPF03372.231.3e-1311
MGP_C3HHeJ_P0045126Exo_endo_phosPF03372.231.3e-1311
MGP_C3HHeJ_P0045123Exo_endo_phosPF03372.231.4e-1311
MGP_C3HHeJ_P0045121Exo_endo_phosPF03372.231.6e-1311
MGP_C3HHeJ_P0045120Exo_endo_phosPF03372.231.8e-1311
MGP_C3HHeJ_P0045117Exo_endo_phosPF03372.232e-1311
MGP_C3HHeJ_P0045115Exo_endo_phosPF03372.232e-1311
MGP_C3HHeJ_P0045124Exo_endo_phosPF03372.239.9e-0911
MGP_C3HHeJ_P0045129DUF1866PF08952.113.1e-6011
MGP_C3HHeJ_P0045128DUF1866PF08952.118.4e-6011
MGP_C3HHeJ_P0045125DUF1866PF08952.111e-5911
MGP_C3HHeJ_P0045122DUF1866PF08952.111.4e-5911
MGP_C3HHeJ_P0045114DUF1866PF08952.111.6e-5911
MGP_C3HHeJ_P0045126DUF1866PF08952.111.7e-5911
MGP_C3HHeJ_P0045119DUF1866PF08952.111.8e-5911
MGP_C3HHeJ_P0045123DUF1866PF08952.111.8e-5911
MGP_C3HHeJ_P0045121DUF1866PF08952.112e-5911
MGP_C3HHeJ_P0045120DUF1866PF08952.112.2e-5911
MGP_C3HHeJ_P0045117DUF1866PF08952.112.3e-5911
MGP_C3HHeJ_P0045115DUF1866PF08952.112.4e-5911
MGP_C3HHeJ_P0045118DUF1866PF08952.116.4e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_C3HHeJ_T0045123-4013-MGP_C3HHeJ_P00451231194 (aa)--
MGP_C3HHeJ_T0045129-1260-MGP_C3HHeJ_P0045129384 (aa)--
MGP_C3HHeJ_T0045125-2634-MGP_C3HHeJ_P0045125824 (aa)--
MGP_C3HHeJ_T0045128-2792-MGP_C3HHeJ_P0045128725 (aa)--
MGP_C3HHeJ_T0045120-4808-MGP_C3HHeJ_P00451201394 (aa)--
MGP_C3HHeJ_T0045119-4072-MGP_C3HHeJ_P00451191216 (aa)--
MGP_C3HHeJ_T0045118-2513-MGP_C3HHeJ_P0045118660 (aa)--
MGP_C3HHeJ_T0045121-5131-MGP_C3HHeJ_P00451211273 (aa)--
MGP_C3HHeJ_T0045115-5009-MGP_C3HHeJ_P00451151479 (aa)--
MGP_C3HHeJ_T0045114-3563XM_006523202MGP_C3HHeJ_P00451141144 (aa)XP_006523265Q9D2G5
MGP_C3HHeJ_T0045117-4793-MGP_C3HHeJ_P00451171434 (aa)--
MGP_C3HHeJ_T0045116-5534-MGP_C3HHeJ_P004511684 (aa)--
MGP_C3HHeJ_T0045124-2523-MGP_C3HHeJ_P0045124535 (aa)--
MGP_C3HHeJ_T0045122-3498-MGP_C3HHeJ_P00451221016 (aa)--
MGP_C3HHeJ_T0045126-3778-MGP_C3HHeJ_P00451261118 (aa)--
MGP_C3HHeJ_T0045127-460--- (aa)--
Gene Model
Click here to download MGP_C3HHeJ_G0022841's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0022841's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_C3HHeJ_G0022841Synj25034.421MGP_C3HHeJ_G0017713-5634.421
MGP_C3HHeJ_G0022841Synj29959.581MGP_C3HHeJ_G0022763Synj110059.770
MGP_C3HHeJ_G0022841Synj25832.653MGP_C3HHeJ_G0035358Ocrl5032.039

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us