EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0023217 (Gene tree)
Gene ID: -
Gene Symbol: U2af1
Alias: 2010107D16Rik|35kDa
Full Name: U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Minus strand
Length: 11796 bases
Position: chr17:31040740-31052535
Accession: 98884
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0046441	zf-CCCH	PF00642.24	1.9e-16	1	2
MGP_C3HHeJ_P0046441	zf-CCCH	PF00642.24	1.9e-16	2	2
MGP_C3HHeJ_P0046442	zf-CCCH	PF00642.24	2e-16	1	2
MGP_C3HHeJ_P0046442	zf-CCCH	PF00642.24	2e-16	2	2
MGP_C3HHeJ_P0046442	RRM_1	PF00076.22	3.6e-06	1	1
MGP_C3HHeJ_P0046441	RRM_1	PF00076.22	3.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0046442	-	1003	-	MGP_C3HHeJ_P0046442	271 (aa)	-	-
MGP_C3HHeJ_T0046441	-	1003	XM_006523472	MGP_C3HHeJ_P0046441	271 (aa)	XP_006523535	Q9D883

Gene Model

Click here to download MGP_C3HHeJ_G0023217's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0023217's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0023217	U2af1	69	89.362	MGP_C3HHeJ_G0031732	U2af1l4	100	90.385