EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0023261 (Gene tree)
Gene ID: -
Gene Symbol: Rab11b
Alias: A730055L17Rik|RAB11B|Rab11BGN
Full Name: RAB11B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Minus strand
Length: 18906 bases
Position: chr17:33232917-33251822
Accession: 99425
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0046598	MMR_HSR1	PF01926.23	9.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0046597	-	6099	XM_011246326	MGP_C3HHeJ_P0046597	303 (aa)	XP_006523950	P46638
MGP_C3HHeJ_T0046598	-	5416	-	MGP_C3HHeJ_P0046598	218 (aa)	-	-
MGP_C3HHeJ_T0046599	-	503	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C3HHeJ_G0023261's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0023261's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0023261	Rab11b	72	37.580	MGP_C3HHeJ_G0021976	Rabl2	69	37.580
MGP_C3HHeJ_G0023261	Rab11b	71	37.013	MGP_C3HHeJ_G0031289	Rasl2-9	70	37.013
MGP_C3HHeJ_G0023261	Rab11b	68	35.333	MGP_C3HHeJ_G0032911	Hras	94	35.519
MGP_C3HHeJ_G0023261	Rab11b	76	41.916	MGP_C3HHeJ_G0023711	Rab12	70	37.736
MGP_C3HHeJ_G0023261	Rab11b	77	40.462	MGP_C3HHeJ_G0035785	Rab9b	86	40.462
MGP_C3HHeJ_G0023261	Rab11b	70	35.897	MGP_C3HHeJ_G0018521	Rab34	70	33.880
MGP_C3HHeJ_G0023261	Rab11b	96	39.524	MGP_C3HHeJ_G0032214	Rab30	97	39.524
MGP_C3HHeJ_G0023261	Rab11b	74	35.404	MGP_C3HHeJ_G0034876	Rab6b	77	35.404
MGP_C3HHeJ_G0023261	Rab11b	95	47.926	MGP_C3HHeJ_G0021035	Rab2b	99	47.926
MGP_C3HHeJ_G0023261	Rab11b	72	42.675	MGP_C3HHeJ_G0026677	Rab22a	83	42.236
MGP_C3HHeJ_G0023261	Rab11b	78	54.971	MGP_C3HHeJ_G0027739	Rab2a	81	54.971
MGP_C3HHeJ_G0023261	Rab11b	94	43.627	MGP_C3HHeJ_G0017639	Rab5b	90	43.627
MGP_C3HHeJ_G0023261	Rab11b	74	48.447	MGP_C3HHeJ_G0018918	Rab5c	75	48.447
MGP_C3HHeJ_G0023261	Rab11b	96	42.584	MGP_C3HHeJ_G0029670	Rab35	99	42.584
MGP_C3HHeJ_G0023261	Rab11b	80	51.724	MGP_C3HHeJ_G0025384	Rab14	97	53.061
MGP_C3HHeJ_G0023261	Rab11b	94	41.667	MGP_C3HHeJ_G0023612	Rab5a	90	41.667
MGP_C3HHeJ_G0023261	Rab11b	100	60.987	MGP_C3HHeJ_G0027115	Rab25	100	60.987
MGP_C3HHeJ_G0023261	Rab11b	75	44.578	MGP_C3HHeJ_G0019120	Rab37	79	44.118
MGP_C3HHeJ_G0023261	Rab11b	81	40.110	MGP_C3HHeJ_G0035937	Rab9	87	40.110
MGP_C3HHeJ_G0023261	Rab11b	94	34.123	MGP_C3HHeJ_G0017111	Rab36	79	34.123
MGP_C3HHeJ_G0023261	Rab11b	78	32.941	MGP_C3HHeJ_G0031183	Kras	93	34.066
MGP_C3HHeJ_G0023261	Rab11b	78	39.205	MGP_C3HHeJ_G0026913	Rab33b	76	39.205
MGP_C3HHeJ_G0023261	Rab11b	55	30.894	MGP_C3HHeJ_G0019447	Arl4a	60	30.894
MGP_C3HHeJ_G0023261	Rab11b	75	34.146	MGP_C3HHeJ_G0029053	Rheb	89	34.146
MGP_C3HHeJ_G0023261	Rab11b	74	47.531	MGP_C3HHeJ_G0023860	Rab18	82	46.154
MGP_C3HHeJ_G0023261	Rab11b	72	40.491	MGP_C3HHeJ_G0030726	Rab7	93	42.857
MGP_C3HHeJ_G0023261	Rab11b	65	30.282	MGP_C3HHeJ_G0016286	Arl8a	72	30.282
MGP_C3HHeJ_G0023261	Rab11b	99	45.116	MGP_C3HHeJ_G0017819	Rab1a	100	45.116
MGP_C3HHeJ_G0023261	Rab11b	70	36.129	MGP_C3HHeJ_G0027390	Nras	95	37.241
MGP_C3HHeJ_G0023261	Rab11b	79	46.552	MGP_C3HHeJ_G0035541	Rab39b	82	46.552
MGP_C3HHeJ_G0023261	Rab11b	100	89.908	MGP_C3HHeJ_G0034626	Rab11a	100	95.425
MGP_C3HHeJ_G0023261	Rab11b	81	40.331	MGP_C3HHeJ_G0035367	Rab33a	75	40.331
MGP_C3HHeJ_G0023261	Rab11b	77	40.476	MGP_C3HHeJ_G0023702	Rab31	86	40.476
MGP_C3HHeJ_G0023261	Rab11b	88	32.984	MGP_C3HHeJ_G0015674	Rab23	80	32.984
MGP_C3HHeJ_G0023261	Rab11b	72	38.217	MGP_C3HHeJ_G0032274	Rab6a	84	36.158
MGP_C3HHeJ_G0023261	Rab11b	72	32.911	MGP_C3HHeJ_G0034853	Mras	81	35.294
MGP_C3HHeJ_G0023261	Rab11b	80	44.000	MGP_C3HHeJ_G0019609	Rab15	82	44.000
MGP_C3HHeJ_G0023261	Rab11b	96	47.619	MGP_C3HHeJ_G0024427	Rab1b	99	47.619