EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0023612 (Gene tree)
Gene ID: -
Gene Symbol: Rab5a
Alias: 2410015H04Rik|AI663973|AU021172|nnyRab5a
Full Name: RAB5A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Plus strand
Length: 27929 bases
Position: chr17:54839388-54867316
Accession: 105926
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0047879	MMR_HSR1	PF01926.23	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0047879	-	2357	-	MGP_C3HHeJ_P0047879	215 (aa)	-	Q9CQD1

Gene Model

Click here to download MGP_C3HHeJ_G0023612's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0023612's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0023612	Rab5a	90	46.429	MGP_C3HHeJ_G0024427	Rab1b	96	46.429
MGP_C3HHeJ_G0023612	Rab5a	73	32.500	MGP_C3HHeJ_G0018521	Rab34	62	32.500
MGP_C3HHeJ_G0023612	Rab5a	90	40.704	MGP_C3HHeJ_G0027115	Rab25	93	40.704
MGP_C3HHeJ_G0023612	Rab5a	78	31.737	MGP_C3HHeJ_G0031289	Rasl2-9	76	31.737
MGP_C3HHeJ_G0023612	Rab5a	56	33.065	MGP_C3HHeJ_G0030626	Arl8b	63	33.065
MGP_C3HHeJ_G0023612	Rab5a	74	40.881	MGP_C3HHeJ_G0019609	Rab15	75	40.881
MGP_C3HHeJ_G0023612	Rab5a	90	34.328	MGP_C3HHeJ_G0035937	Rab9	97	34.328
MGP_C3HHeJ_G0023612	Rab5a	76	32.727	MGP_C3HHeJ_G0027390	Nras	99	34.667
MGP_C3HHeJ_G0023612	Rab5a	78	41.916	MGP_C3HHeJ_G0021035	Rab2b	79	44.079
MGP_C3HHeJ_G0023612	Rab5a	91	47.449	MGP_C3HHeJ_G0023702	Rab31	98	47.449
MGP_C3HHeJ_G0023612	Rab5a	95	41.546	MGP_C3HHeJ_G0032274	Rab6a	98	41.546
MGP_C3HHeJ_G0023612	Rab5a	100	87.500	MGP_C3HHeJ_G0018918	Rab5c	100	87.500
MGP_C3HHeJ_G0023612	Rab5a	90	41.667	MGP_C3HHeJ_G0023261	Rab11b	94	41.667
MGP_C3HHeJ_G0023612	Rab5a	75	41.566	MGP_C3HHeJ_G0035367	Rab33a	70	41.566
MGP_C3HHeJ_G0023612	Rab5a	81	43.678	MGP_C3HHeJ_G0032214	Rab30	86	43.678
MGP_C3HHeJ_G0023612	Rab5a	95	42.718	MGP_C3HHeJ_G0034876	Rab6b	98	42.718
MGP_C3HHeJ_G0023612	Rab5a	81	37.989	MGP_C3HHeJ_G0023711	Rab12	62	37.989
MGP_C3HHeJ_G0023612	Rab5a	90	43.814	MGP_C3HHeJ_G0017819	Rab1a	95	43.814
MGP_C3HHeJ_G0023612	Rab5a	90	40.816	MGP_C3HHeJ_G0023860	Rab18	93	40.816
MGP_C3HHeJ_G0023612	Rab5a	75	41.615	MGP_C3HHeJ_G0027739	Rab2a	97	36.667
MGP_C3HHeJ_G0023612	Rab5a	55	30.159	MGP_C3HHeJ_G0019447	Arl4a	60	30.159
MGP_C3HHeJ_G0023612	Rab5a	90	35.323	MGP_C3HHeJ_G0035785	Rab9b	97	35.323
MGP_C3HHeJ_G0023612	Rab5a	75	36.585	MGP_C3HHeJ_G0035541	Rab39b	77	36.585
MGP_C3HHeJ_G0023612	Rab5a	60	32.576	MGP_C3HHeJ_G0016286	Arl8a	66	32.576
MGP_C3HHeJ_G0023612	Rab5a	82	31.667	MGP_C3HHeJ_G0032911	Hras	94	31.667
MGP_C3HHeJ_G0023612	Rab5a	77	40.351	MGP_C3HHeJ_G0026913	Rab33b	75	40.351
MGP_C3HHeJ_G0023612	Rab5a	74	38.125	MGP_C3HHeJ_G0015674	Rab23	67	38.125
MGP_C3HHeJ_G0023612	Rab5a	74	35.928	MGP_C3HHeJ_G0021976	Rabl2	72	35.928
MGP_C3HHeJ_G0023612	Rab5a	91	41.951	MGP_C3HHeJ_G0034626	Rab11a	88	48.148
MGP_C3HHeJ_G0023612	Rab5a	90	49.231	MGP_C3HHeJ_G0026677	Rab22a	98	49.231
MGP_C3HHeJ_G0023612	Rab5a	80	41.243	MGP_C3HHeJ_G0030726	Rab7	97	45.263
MGP_C3HHeJ_G0023612	Rab5a	95	41.951	MGP_C3HHeJ_G0019120	Rab37	93	41.951
MGP_C3HHeJ_G0023612	Rab5a	90	37.436	MGP_C3HHeJ_G0029670	Rab35	96	37.436
MGP_C3HHeJ_G0023612	Rab5a	89	38.614	MGP_C3HHeJ_G0025384	Rab14	94	38.614
MGP_C3HHeJ_G0023612	Rab5a	100	81.860	MGP_C3HHeJ_G0017639	Rab5b	100	81.860
MGP_C3HHeJ_G0023612	Rab5a	91	30.244	MGP_C3HHeJ_G0017111	Rab36	77	30.244
MGP_C3HHeJ_G0023612	Rab5a	73	33.121	MGP_C3HHeJ_G0029053	Rheb	85	33.121
MGP_C3HHeJ_G0023612	Rab5a	80	31.667	MGP_C3HHeJ_G0031183	Kras	94	31.667