EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0023942 (Gene tree)
Gene ID: -
Gene Symbol: Celf4
Alias: A230070D14Rik|BRUNOL-4|Brul4|Brunol4|C130060B05Rik
Full Name: CUGBP%2C Elav-like family member 4
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Minus strand
Length: 290024 bases
Position: chr18:23247799-23537822
Accession: 1932407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0048842	RRM_1	PF00076.22	7.3e-53	1	3
MGP_C3HHeJ_P0048842	RRM_1	PF00076.22	7.3e-53	2	3
MGP_C3HHeJ_P0048842	RRM_1	PF00076.22	7.3e-53	3	3
MGP_C3HHeJ_P0048841	RRM_1	PF00076.22	6.2e-43	1	3
MGP_C3HHeJ_P0048841	RRM_1	PF00076.22	6.2e-43	2	3
MGP_C3HHeJ_P0048841	RRM_1	PF00076.22	6.2e-43	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0048839	-	3498	XM_006525504	MGP_C3HHeJ_P0048839	453 (aa)	XP_006525571	Q7TSY6
MGP_C3HHeJ_T0048840	-	3225	-	MGP_C3HHeJ_P0048840	362 (aa)	-	-
MGP_C3HHeJ_T0048842	-	4002	-	MGP_C3HHeJ_P0048842	504 (aa)	-	-
MGP_C3HHeJ_T0048841	-	3942	-	MGP_C3HHeJ_P0048841	484 (aa)	-	-

Gene Model

Click here to download MGP_C3HHeJ_G0023942's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0023942's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0023942	Celf4	91	35.802	MGP_C3HHeJ_G0028272	Elavl4	88	38.272
MGP_C3HHeJ_G0023942	Celf4	100	41.787	MGP_C3HHeJ_G0025065	Celf2	90	55.556
MGP_C3HHeJ_G0023942	Celf4	100	42.430	MGP_C3HHeJ_G0025858	Celf1	100	45.200
MGP_C3HHeJ_G0023942	Celf4	57	37.500	MGP_C3HHeJ_G0028436	Pabpc4	67	33.803
MGP_C3HHeJ_G0023942	Celf4	63	30.682	MGP_C3HHeJ_G0030756	Tia1	87	32.911
MGP_C3HHeJ_G0023942	Celf4	84	63.333	MGP_C3HHeJ_G0017323	Celf5	85	66.667
MGP_C3HHeJ_G0023942	Celf4	62	36.842	MGP_C3HHeJ_G0022870	Pabpc6	62	36.842
MGP_C3HHeJ_G0023942	Celf4	68	40.789	MGP_C3HHeJ_G0035085	Rbms3	72	40.789
MGP_C3HHeJ_G0023942	Celf4	91	37.037	MGP_C3HHeJ_G0028138	Elavl2	88	39.506
MGP_C3HHeJ_G0023942	Celf4	100	63.275	MGP_C3HHeJ_G0027259	Celf3	100	69.072
MGP_C3HHeJ_G0023942	Celf4	73	36.232	MGP_C3HHeJ_G0033028	Elavl1	95	43.210
MGP_C3HHeJ_G0023942	Celf4	99	67.066	MGP_C3HHeJ_G0034585	Celf6	100	67.200
MGP_C3HHeJ_G0023942	Celf4	67	39.744	MGP_C3HHeJ_G0034155	Elavl3	70	39.506