EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0024136 (Gene tree)
Gene ID: -
Gene Symbol: Ythdc2
Alias: 3010002F02Rik|BC037178
Full Name: YTH domain containing 2
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Plus strand
Length: 68889 bases
Position: chr18:43258485-43327373
Accession: 2448561
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0049293	R3H	PF01424.22	1.4e-10	1	1
MGP_C3HHeJ_P0049293	DEAD	PF00270.29	2.5e-09	1	1
MGP_C3HHeJ_P0049293	YTH	PF04146.15	1.2e-42	1	1
MGP_C3HHeJ_P0049293	HA2	PF04408.23	6.7e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0049293	-	7213	-	MGP_C3HHeJ_P0049293	1445 (aa)	-	B2RR83
MGP_C3HHeJ_T0049294	-	1331	-	-	- (aa)	-	-
MGP_C3HHeJ_T0049295	-	4303	-	MGP_C3HHeJ_P0049295	585 (aa)	-	-

Gene Model

Click here to download MGP_C3HHeJ_G0024136's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0024136's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0024136	Ythdc2	90	35.912	MGP_C3HHeJ_G0016364	Dhx9	56	47.685
MGP_C3HHeJ_G0024136	Ythdc2	69	31.785	MGP_C3HHeJ_G0029243	Dhx15	80	41.262
MGP_C3HHeJ_G0024136	Ythdc2	88	36.015	MGP_C3HHeJ_G0026975	Dhx36	80	41.667
MGP_C3HHeJ_G0024136	Ythdc2	70	35.392	MGP_C3HHeJ_G0035025	Dhx30	56	47.236
MGP_C3HHeJ_G0024136	Ythdc2	89	32.714	MGP_C3HHeJ_G0020681	Dhx29	55	46.491
MGP_C3HHeJ_G0024136	Ythdc2	72	36.504	MGP_C3HHeJ_G0023783	Dhx57	55	50.800