EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0024336 (Gene tree)
Gene ID: -
Gene Symbol: Zfp236
Alias: AI447957|Gm335|LOC240456
Full Name: zinc finger protein 236
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Minus strand
Length: 105450 bases
Position: chr18:82462403-82567852
Accession: 1926950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0049908	zf-C2H2	PF00096.26	1.1e-110	1	19
MGP_C3HHeJ_P0049908	zf-C2H2	PF00096.26	1.1e-110	2	19
MGP_C3HHeJ_P0049908	zf-C2H2	PF00096.26	1.1e-110	3	19
MGP_C3HHeJ_P0049908	zf-C2H2	PF00096.26	1.1e-110	4	19
MGP_C3HHeJ_P0049908	zf-C2H2	PF00096.26	1.1e-110	5	19
MGP_C3HHeJ_P0049908	zf-C2H2	PF00096.26	1.1e-110	6	19
MGP_C3HHeJ_P0049908	zf-C2H2	PF00096.26	1.1e-110	7	19
MGP_C3HHeJ_P0049908	zf-C2H2	PF00096.26	1.1e-110	8	19
MGP_C3HHeJ_P0049908	zf-C2H2	PF00096.26	1.1e-110	9	19
MGP_C3HHeJ_P0049908	zf-C2H2	PF00096.26	1.1e-110	10	19
MGP_C3HHeJ_P0049908	zf-C2H2	PF00096.26	1.1e-110	11	19
MGP_C3HHeJ_P0049908	zf-C2H2	PF00096.26	1.1e-110	12	19
MGP_C3HHeJ_P0049908	zf-C2H2	PF00096.26	1.1e-110	13	19
MGP_C3HHeJ_P0049908	zf-C2H2	PF00096.26	1.1e-110	14	19
MGP_C3HHeJ_P0049908	zf-C2H2	PF00096.26	1.1e-110	15	19
MGP_C3HHeJ_P0049908	zf-C2H2	PF00096.26	1.1e-110	16	19
MGP_C3HHeJ_P0049908	zf-C2H2	PF00096.26	1.1e-110	17	19
MGP_C3HHeJ_P0049908	zf-C2H2	PF00096.26	1.1e-110	18	19
MGP_C3HHeJ_P0049908	zf-C2H2	PF00096.26	1.1e-110	19	19
MGP_C3HHeJ_P0049904	zf-C2H2	PF00096.26	5.8e-108	1	18
MGP_C3HHeJ_P0049904	zf-C2H2	PF00096.26	5.8e-108	2	18
MGP_C3HHeJ_P0049904	zf-C2H2	PF00096.26	5.8e-108	3	18
MGP_C3HHeJ_P0049904	zf-C2H2	PF00096.26	5.8e-108	4	18
MGP_C3HHeJ_P0049904	zf-C2H2	PF00096.26	5.8e-108	5	18
MGP_C3HHeJ_P0049904	zf-C2H2	PF00096.26	5.8e-108	6	18
MGP_C3HHeJ_P0049904	zf-C2H2	PF00096.26	5.8e-108	7	18
MGP_C3HHeJ_P0049904	zf-C2H2	PF00096.26	5.8e-108	8	18
MGP_C3HHeJ_P0049904	zf-C2H2	PF00096.26	5.8e-108	9	18
MGP_C3HHeJ_P0049904	zf-C2H2	PF00096.26	5.8e-108	10	18
MGP_C3HHeJ_P0049904	zf-C2H2	PF00096.26	5.8e-108	11	18
MGP_C3HHeJ_P0049904	zf-C2H2	PF00096.26	5.8e-108	12	18
MGP_C3HHeJ_P0049904	zf-C2H2	PF00096.26	5.8e-108	13	18
MGP_C3HHeJ_P0049904	zf-C2H2	PF00096.26	5.8e-108	14	18
MGP_C3HHeJ_P0049904	zf-C2H2	PF00096.26	5.8e-108	15	18
MGP_C3HHeJ_P0049904	zf-C2H2	PF00096.26	5.8e-108	16	18
MGP_C3HHeJ_P0049904	zf-C2H2	PF00096.26	5.8e-108	17	18
MGP_C3HHeJ_P0049904	zf-C2H2	PF00096.26	5.8e-108	18	18
MGP_C3HHeJ_P0049910	zf-C2H2	PF00096.26	6.8e-06	1	1
MGP_C3HHeJ_P0049904	zf-met	PF12874.7	5.9e-06	1	4
MGP_C3HHeJ_P0049904	zf-met	PF12874.7	5.9e-06	2	4
MGP_C3HHeJ_P0049904	zf-met	PF12874.7	5.9e-06	3	4
MGP_C3HHeJ_P0049904	zf-met	PF12874.7	5.9e-06	4	4
MGP_C3HHeJ_P0049908	zf-met	PF12874.7	3.4e-05	1	4
MGP_C3HHeJ_P0049908	zf-met	PF12874.7	3.4e-05	2	4
MGP_C3HHeJ_P0049908	zf-met	PF12874.7	3.4e-05	3	4
MGP_C3HHeJ_P0049908	zf-met	PF12874.7	3.4e-05	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0049908	-	6059	-	MGP_C3HHeJ_P0049908	1847 (aa)	-	-
MGP_C3HHeJ_T0049909	-	665	-	-	- (aa)	-	-
MGP_C3HHeJ_T0049906	-	3227	-	MGP_C3HHeJ_P0049906	42 (aa)	-	-
MGP_C3HHeJ_T0049907	-	6170	-	MGP_C3HHeJ_P0049907	485 (aa)	-	-
MGP_C3HHeJ_T0049904	-	9626	XM_006526490	MGP_C3HHeJ_P0049904	1799 (aa)	XP_006526553	B2RR24
MGP_C3HHeJ_T0049905	-	9663	-	MGP_C3HHeJ_P0049905	1840 (aa)	-	-
MGP_C3HHeJ_T0049910	-	410	-	MGP_C3HHeJ_P0049910	65 (aa)	-	-

Gene Model

Click here to download MGP_C3HHeJ_G0024336's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0024336's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0024336	Zfp236	61	47.674	MGP_C3HHeJ_G0020023	Zkscan4	52	47.674
MGP_C3HHeJ_G0024336	Zfp236	74	42.857	MGP_C3HHeJ_G0031823	Zfp715	69	41.935
MGP_C3HHeJ_G0024336	Zfp236	66	45.455	MGP_C3HHeJ_G0030551	Zfp637	85	51.807
MGP_C3HHeJ_G0024336	Zfp236	61	41.228	MGP_C3HHeJ_G0026182	Zfp661	69	42.857
MGP_C3HHeJ_G0024336	Zfp236	60	45.652	MGP_C3HHeJ_G0033828	Zfp1	67	45.652
MGP_C3HHeJ_G0024336	Zfp236	63	42.500	MGP_C3HHeJ_G0031558	Zfp574	95	41.304
MGP_C3HHeJ_G0024336	Zfp236	57	36.242	MGP_C3HHeJ_G0033911	Snai3	67	47.297
MGP_C3HHeJ_G0024336	Zfp236	78	36.471	MGP_C3HHeJ_G0018101	Zfp672	96	41.096
MGP_C3HHeJ_G0024336	Zfp236	77	43.860	MGP_C3HHeJ_G0030900	Prdm5	87	46.739
MGP_C3HHeJ_G0024336	Zfp236	66	38.824	MGP_C3HHeJ_G0016321	Zbtb41	61	38.824
MGP_C3HHeJ_G0024336	Zfp236	58	48.780	MGP_C3HHeJ_G0032730	Zfp768	53	45.536
MGP_C3HHeJ_G0024336	Zfp236	70	41.837	MGP_C3HHeJ_G0032733	-	92	40.816
MGP_C3HHeJ_G0024336	Zfp236	58	42.177	MGP_C3HHeJ_G0032732	E430018J23Rik	58	42.177
MGP_C3HHeJ_G0024336	Zfp236	79	47.059	MGP_C3HHeJ_G0031693	Zfp420	99	47.059
MGP_C3HHeJ_G0024336	Zfp236	81	39.437	MGP_C3HHeJ_G0020463	Zfp748	94	41.905
MGP_C3HHeJ_G0024336	Zfp236	76	34.940	MGP_C3HHeJ_G0032757	Zfp646	90	34.940
MGP_C3HHeJ_G0024336	Zfp236	79	38.732	MGP_C3HHeJ_G0022976	Zfp945	79	40.000
MGP_C3HHeJ_G0024336	Zfp236	79	36.691	MGP_C3HHeJ_G0031632	Zfp974	89	45.652
MGP_C3HHeJ_G0024336	Zfp236	69	42.727	MGP_C3HHeJ_G0028746	Zbtb17	61	42.727
MGP_C3HHeJ_G0024336	Zfp236	71	40.157	MGP_C3HHeJ_G0018152	Zfp867	94	45.902
MGP_C3HHeJ_G0024336	Zfp236	68	44.545	MGP_C3HHeJ_G0026610	Zfp334	68	44.545
MGP_C3HHeJ_G0024336	Zfp236	62	42.647	MGP_C3HHeJ_G0031528	Zfp94	76	42.647
MGP_C3HHeJ_G0024336	Zfp236	64	39.806	MGP_C3HHeJ_G0031521	Zfp112	52	42.742
MGP_C3HHeJ_G0024336	Zfp236	74	43.411	MGP_C3HHeJ_G0031522	Zfp235	66	43.411
MGP_C3HHeJ_G0024336	Zfp236	62	42.857	MGP_C3HHeJ_G0031527	Zfp61	57	42.857
MGP_C3HHeJ_G0024336	Zfp236	81	53.333	MGP_C3HHeJ_G0026647	Sall4	73	53.333
MGP_C3HHeJ_G0024336	Zfp236	78	41.667	MGP_C3HHeJ_G0026648	Zfp64	70	42.500
MGP_C3HHeJ_G0024336	Zfp236	58	47.727	MGP_C3HHeJ_G0020445	Rslcan18	70	47.727
MGP_C3HHeJ_G0024336	Zfp236	80	46.575	MGP_C3HHeJ_G0020446	Zfp759	97	37.975
MGP_C3HHeJ_G0024336	Zfp236	62	44.318	MGP_C3HHeJ_G0034162	Zfp872	94	40.800
MGP_C3HHeJ_G0024336	Zfp236	76	37.143	MGP_C3HHeJ_G0022983	Zscan10	99	37.143
MGP_C3HHeJ_G0024336	Zfp236	59	41.748	MGP_C3HHeJ_G0018742	Zfp652	60	41.748
MGP_C3HHeJ_G0024336	Zfp236	54	46.739	MGP_C3HHeJ_G0029542	Gfi1	100	46.739
MGP_C3HHeJ_G0024336	Zfp236	65	44.643	MGP_C3HHeJ_G0031526	Zfp108	58	45.000
MGP_C3HHeJ_G0024336	Zfp236	78	40.690	MGP_C3HHeJ_G0033668	Zfp319	87	40.690
MGP_C3HHeJ_G0024336	Zfp236	68	44.643	MGP_C3HHeJ_G0031280	-	66	44.643
MGP_C3HHeJ_G0024336	Zfp236	53	30.734	MGP_C3HHeJ_G0031282	Zfp784	79	40.244
MGP_C3HHeJ_G0024336	Zfp236	66	44.643	MGP_C3HHeJ_G0031815	-	61	44.444
MGP_C3HHeJ_G0024336	Zfp236	70	48.864	MGP_C3HHeJ_G0026836	Mynn	62	48.864
MGP_C3HHeJ_G0024336	Zfp236	69	42.222	MGP_C3HHeJ_G0022953	Zfp677	78	42.222
MGP_C3HHeJ_G0024336	Zfp236	75	45.283	MGP_C3HHeJ_G0022955	Zfp51	75	45.283
MGP_C3HHeJ_G0024336	Zfp236	69	44.643	MGP_C3HHeJ_G0031279	Zfp865	78	44.643
MGP_C3HHeJ_G0024336	Zfp236	86	31.818	MGP_C3HHeJ_G0016932	Zbtb24	54	45.794
MGP_C3HHeJ_G0024336	Zfp236	70	41.121	MGP_C3HHeJ_G0033454	Zfp882	87	45.652
MGP_C3HHeJ_G0024336	Zfp236	81	44.304	MGP_C3HHeJ_G0030394	Repin1	99	41.667
MGP_C3HHeJ_G0024336	Zfp236	69	40.559	MGP_C3HHeJ_G0021752	Zfp251	79	40.559
MGP_C3HHeJ_G0024336	Zfp236	71	41.228	MGP_C3HHeJ_G0033600	Zfp423	94	41.228
MGP_C3HHeJ_G0024336	Zfp236	63	42.697	MGP_C3HHeJ_G0018006	Zfp454	75	42.982
MGP_C3HHeJ_G0024336	Zfp236	62	43.023	MGP_C3HHeJ_G0029207	Zbtb49	62	47.887