EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0025065 (Gene tree)
Gene ID: -
Gene Symbol: Celf2
Alias: B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|ETR-3|Etr-3|Napor|Napor-2|mETR-3
Full Name: CUGBP%2C Elav-like family member 2
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Minus strand
Length: 996189 bases
Position: chr2:3586944-4583132
Accession: 1338822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0052146	RRM_1	PF00076.22	2.5e-51	1	3
MGP_C3HHeJ_P0052146	RRM_1	PF00076.22	2.5e-51	2	3
MGP_C3HHeJ_P0052146	RRM_1	PF00076.22	2.5e-51	3	3
MGP_C3HHeJ_P0052147	RRM_1	PF00076.22	2.5e-51	1	3
MGP_C3HHeJ_P0052147	RRM_1	PF00076.22	2.5e-51	2	3
MGP_C3HHeJ_P0052147	RRM_1	PF00076.22	2.5e-51	3	3
MGP_C3HHeJ_P0052155	RRM_1	PF00076.22	2.6e-51	1	3
MGP_C3HHeJ_P0052155	RRM_1	PF00076.22	2.6e-51	2	3
MGP_C3HHeJ_P0052155	RRM_1	PF00076.22	2.6e-51	3	3
MGP_C3HHeJ_P0052157	RRM_1	PF00076.22	2.6e-51	1	3
MGP_C3HHeJ_P0052157	RRM_1	PF00076.22	2.6e-51	2	3
MGP_C3HHeJ_P0052157	RRM_1	PF00076.22	2.6e-51	3	3
MGP_C3HHeJ_P0052156	RRM_1	PF00076.22	2.7e-51	1	3
MGP_C3HHeJ_P0052156	RRM_1	PF00076.22	2.7e-51	2	3
MGP_C3HHeJ_P0052156	RRM_1	PF00076.22	2.7e-51	3	3
MGP_C3HHeJ_P0052152	RRM_1	PF00076.22	3.1e-51	1	3
MGP_C3HHeJ_P0052152	RRM_1	PF00076.22	3.1e-51	2	3
MGP_C3HHeJ_P0052152	RRM_1	PF00076.22	3.1e-51	3	3
MGP_C3HHeJ_P0052149	RRM_1	PF00076.22	3.2e-51	1	3
MGP_C3HHeJ_P0052149	RRM_1	PF00076.22	3.2e-51	2	3
MGP_C3HHeJ_P0052149	RRM_1	PF00076.22	3.2e-51	3	3
MGP_C3HHeJ_P0052150	RRM_1	PF00076.22	3.2e-51	1	3
MGP_C3HHeJ_P0052150	RRM_1	PF00076.22	3.2e-51	2	3
MGP_C3HHeJ_P0052150	RRM_1	PF00076.22	3.2e-51	3	3
MGP_C3HHeJ_P0052153	RRM_1	PF00076.22	3.4e-51	1	3
MGP_C3HHeJ_P0052153	RRM_1	PF00076.22	3.4e-51	2	3
MGP_C3HHeJ_P0052153	RRM_1	PF00076.22	3.4e-51	3	3
MGP_C3HHeJ_P0052154	RRM_1	PF00076.22	4.9e-39	1	3
MGP_C3HHeJ_P0052154	RRM_1	PF00076.22	4.9e-39	2	3
MGP_C3HHeJ_P0052154	RRM_1	PF00076.22	4.9e-39	3	3
MGP_C3HHeJ_P0052158	RRM_1	PF00076.22	5.8e-39	1	3
MGP_C3HHeJ_P0052158	RRM_1	PF00076.22	5.8e-39	2	3
MGP_C3HHeJ_P0052158	RRM_1	PF00076.22	5.8e-39	3	3
MGP_C3HHeJ_P0052148	RRM_1	PF00076.22	6.1e-39	1	3
MGP_C3HHeJ_P0052148	RRM_1	PF00076.22	6.1e-39	2	3
MGP_C3HHeJ_P0052148	RRM_1	PF00076.22	6.1e-39	3	3
MGP_C3HHeJ_P0052151	RRM_1	PF00076.22	6.5e-39	1	3
MGP_C3HHeJ_P0052151	RRM_1	PF00076.22	6.5e-39	2	3
MGP_C3HHeJ_P0052151	RRM_1	PF00076.22	6.5e-39	3	3
MGP_C3HHeJ_P0052165	RRM_1	PF00076.22	7.5e-19	1	1
MGP_C3HHeJ_P0052161	RRM_1	PF00076.22	2.4e-15	1	1
MGP_C3HHeJ_P0052168	RRM_1	PF00076.22	2.2e-14	1	1
MGP_C3HHeJ_P0052170	RRM_1	PF00076.22	1.1e-13	1	1
MGP_C3HHeJ_P0052171	RRM_1	PF00076.22	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0052159	-	1996	-	MGP_C3HHeJ_P0052159	443 (aa)	-	-
MGP_C3HHeJ_T0052158	-	2195	-	MGP_C3HHeJ_P0052158	460 (aa)	-	-
MGP_C3HHeJ_T0052173	-	769	-	-	- (aa)	-	-
MGP_C3HHeJ_T0052172	-	1972	-	-	- (aa)	-	-
MGP_C3HHeJ_T0052171	-	331	-	MGP_C3HHeJ_P0052171	46 (aa)	-	-
MGP_C3HHeJ_T0052162	-	4798	-	-	- (aa)	-	-
MGP_C3HHeJ_T0052151	-	3853	-	MGP_C3HHeJ_P0052151	472 (aa)	-	-
MGP_C3HHeJ_T0052150	-	5469	-	MGP_C3HHeJ_P0052150	526 (aa)	-	-
MGP_C3HHeJ_T0052153	-	2525	-	MGP_C3HHeJ_P0052153	520 (aa)	-	-
MGP_C3HHeJ_T0052152	-	3646	-	MGP_C3HHeJ_P0052152	508 (aa)	-	-
MGP_C3HHeJ_T0052155	-	1721	-	MGP_C3HHeJ_P0052155	488 (aa)	-	-
MGP_C3HHeJ_T0052154	-	2223	-	MGP_C3HHeJ_P0052154	440 (aa)	-	-
MGP_C3HHeJ_T0052157	-	2391	-	MGP_C3HHeJ_P0052157	488 (aa)	-	-
MGP_C3HHeJ_T0052156	-	2397	-	MGP_C3HHeJ_P0052156	490 (aa)	-	-
MGP_C3HHeJ_T0052170	-	529	-	MGP_C3HHeJ_P0052170	159 (aa)	-	-
MGP_C3HHeJ_T0052164	-	923	-	-	- (aa)	-	-
MGP_C3HHeJ_T0052165	-	630	-	MGP_C3HHeJ_P0052165	134 (aa)	-	-
MGP_C3HHeJ_T0052166	-	4802	-	-	- (aa)	-	-
MGP_C3HHeJ_T0052167	-	2075	-	-	- (aa)	-	-
MGP_C3HHeJ_T0052160	-	1240	-	-	- (aa)	-	-
MGP_C3HHeJ_T0052161	-	1024	-	MGP_C3HHeJ_P0052161	276 (aa)	-	-
MGP_C3HHeJ_T0052148	-	8889	-	MGP_C3HHeJ_P0052148	478 (aa)	-	-
MGP_C3HHeJ_T0052149	-	8771	-	MGP_C3HHeJ_P0052149	526 (aa)	-	-
MGP_C3HHeJ_T0052146	-	7733	XM_006497333	MGP_C3HHeJ_P0052146	484 (aa)	XP_006497396	Q9Z0H4
MGP_C3HHeJ_T0052147	-	7506	-	MGP_C3HHeJ_P0052147	484 (aa)	-	-
MGP_C3HHeJ_T0052163	-	405	-	-	- (aa)	-	-
MGP_C3HHeJ_T0052168	-	402	-	MGP_C3HHeJ_P0052168	92 (aa)	-	-
MGP_C3HHeJ_T0052169	-	4143	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C3HHeJ_G0025065's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0025065's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0025065	Celf2	79	80.952	MGP_C3HHeJ_G0034585	Celf6	91	45.567
MGP_C3HHeJ_G0025065	Celf2	82	34.667	MGP_C3HHeJ_G0034155	Elavl3	73	40.741
MGP_C3HHeJ_G0025065	Celf2	100	88.060	MGP_C3HHeJ_G0025858	Celf1	100	80.082
MGP_C3HHeJ_G0025065	Celf2	88	32.099	MGP_C3HHeJ_G0035420	Rbmx	78	30.000
MGP_C3HHeJ_G0025065	Celf2	64	43.210	MGP_C3HHeJ_G0033028	Elavl1	81	43.210
MGP_C3HHeJ_G0025065	Celf2	87	33.333	MGP_C3HHeJ_G0028138	Elavl2	83	39.506
MGP_C3HHeJ_G0025065	Celf2	82	33.333	MGP_C3HHeJ_G0017249	Cirbp	80	32.558
MGP_C3HHeJ_G0025065	Celf2	57	35.714	MGP_C3HHeJ_G0021538	Pabpc1	51	34.884
MGP_C3HHeJ_G0025065	Celf2	77	39.474	MGP_C3HHeJ_G0017611	Rbms2	51	39.474
MGP_C3HHeJ_G0025065	Celf2	51	35.443	MGP_C3HHeJ_G0030756	Tia1	83	35.443
MGP_C3HHeJ_G0025065	Celf2	57	38.372	MGP_C3HHeJ_G0028436	Pabpc4	68	31.944
MGP_C3HHeJ_G0025065	Celf2	77	39.474	MGP_C3HHeJ_G0035085	Rbms3	75	37.079
MGP_C3HHeJ_G0025065	Celf2	61	35.714	MGP_C3HHeJ_G0015805	Boll	57	32.000
MGP_C3HHeJ_G0025065	Celf2	92	53.659	MGP_C3HHeJ_G0017323	Celf5	52	53.659
MGP_C3HHeJ_G0025065	Celf2	61	38.272	MGP_C3HHeJ_G0028272	Elavl4	81	38.272
MGP_C3HHeJ_G0025065	Celf2	61	34.177	MGP_C3HHeJ_G0032780	Tial1	65	31.481
MGP_C3HHeJ_G0025065	Celf2	57	34.884	MGP_C3HHeJ_G0026551	Pabpc1l	53	34.884
MGP_C3HHeJ_G0025065	Celf2	57	34.211	MGP_C3HHeJ_G0022870	Pabpc6	51	34.211
MGP_C3HHeJ_G0025065	Celf2	90	55.556	MGP_C3HHeJ_G0023942	Celf4	100	41.787
MGP_C3HHeJ_G0025065	Celf2	94	83.333	MGP_C3HHeJ_G0027259	Celf3	90	55.801