EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_C3HHeJ_G0025539 (Gene tree)
Gene ID
-
Gene Symbol
Ssb
Alias
La protein|SS-B|Ss-b|autoantigen La
Full Name
Sjogren syndrome antigen B
Gene Type
protein_coding
Species
Mus_musculus_c3hhej
Status
putative
Strand
Plus strand
Length
10284 bases
Position
chr2:69217533-69227816
Accession
98423
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_C3HHeJ_P0054858RRM_1PF00076.224e-1211
MGP_C3HHeJ_P0054859RRM_1PF00076.224e-1211
MGP_C3HHeJ_P0054861RRM_1PF00076.227.1e-1011
MGP_C3HHeJ_P0054863RRM_3PF08777.112.8e-2811
MGP_C3HHeJ_P0054858RRM_3PF08777.117.2e-2811
MGP_C3HHeJ_P0054859RRM_3PF08777.117.2e-2811
MGP_C3HHeJ_P0054861LaPF05383.172.7e-2211
MGP_C3HHeJ_P0054858LaPF05383.177.7e-2211
MGP_C3HHeJ_P0054859LaPF05383.177.7e-2211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_C3HHeJ_T0054863-991-MGP_C3HHeJ_P0054863229 (aa)--
MGP_C3HHeJ_T0054862-666--- (aa)--
MGP_C3HHeJ_T0054858-2001XM_006499069MGP_C3HHeJ_P0054858415 (aa)XP_006499132P32067
MGP_C3HHeJ_T0054859-2088-MGP_C3HHeJ_P0054859415 (aa)--
MGP_C3HHeJ_T0054861-634-MGP_C3HHeJ_P0054861184 (aa)--
MGP_C3HHeJ_T0054860-1563-MGP_C3HHeJ_P0054860159 (aa)--
Gene Model
Click here to download MGP_C3HHeJ_G0025539's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0025539's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_C3HHeJ_G0025539Ssb5341.860MGP_C3HHeJ_G0027561-6347.059

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