EuRBPDB

Description

Ensembl ID: MGP_C3HHeJ_G0025858 (Gene tree)
Gene ID: -
Gene Symbol: Celf1
Alias: 1600010O03Rik|AA407467|Brunol2|CUG-BP|CUG-BP1|CUGBP|Cugbp|Cugbp1|D2Wsu101e|HNAB50|NAB50
Full Name: CUGBP%2C Elav-like family member 1
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Plus strand
Length: 82998 bases
Position: chr2:91272160-91355157
Accession: 1342295
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0055693	RRM_1	PF00076.22	4e-52	1	3
MGP_C3HHeJ_P0055693	RRM_1	PF00076.22	4e-52	2	3
MGP_C3HHeJ_P0055693	RRM_1	PF00076.22	4e-52	3	3
MGP_C3HHeJ_P0055687	RRM_1	PF00076.22	4.2e-52	1	3
MGP_C3HHeJ_P0055687	RRM_1	PF00076.22	4.2e-52	2	3
MGP_C3HHeJ_P0055687	RRM_1	PF00076.22	4.2e-52	3	3
MGP_C3HHeJ_P0055692	RRM_1	PF00076.22	5.2e-52	1	3
MGP_C3HHeJ_P0055692	RRM_1	PF00076.22	5.2e-52	2	3
MGP_C3HHeJ_P0055692	RRM_1	PF00076.22	5.2e-52	3	3
MGP_C3HHeJ_P0055690	RRM_1	PF00076.22	6.7e-52	1	3
MGP_C3HHeJ_P0055690	RRM_1	PF00076.22	6.7e-52	2	3
MGP_C3HHeJ_P0055690	RRM_1	PF00076.22	6.7e-52	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0055694	-	436	-	-	- (aa)	-	-
MGP_C3HHeJ_T0055688	-	426	-	-	- (aa)	-	-
MGP_C3HHeJ_T0055689	-	478	-	-	- (aa)	-	-
MGP_C3HHeJ_T0055693	-	4432	-	MGP_C3HHeJ_P0055693	483 (aa)	-	-
MGP_C3HHeJ_T0055692	-	7579	-	MGP_C3HHeJ_P0055692	513 (aa)	-	-
MGP_C3HHeJ_T0055691	-	271	-	-	- (aa)	-	-
MGP_C3HHeJ_T0055690	-	5847	-	MGP_C3HHeJ_P0055690	543 (aa)	-	-
MGP_C3HHeJ_T0055686	-	350	-	-	- (aa)	-	-
MGP_C3HHeJ_T0055687	-	7851	-	MGP_C3HHeJ_P0055687	487 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0025858	Celf1	69	41.975	MGP_C3HHeJ_G0028138	Elavl2	85	41.975
MGP_C3HHeJ_G0025858	Celf1	53	43.421	MGP_C3HHeJ_G0035085	Rbms3	68	43.421
MGP_C3HHeJ_G0025858	Celf1	62	40.741	MGP_C3HHeJ_G0028272	Elavl4	78	40.741
MGP_C3HHeJ_G0025858	Celf1	57	37.879	MGP_C3HHeJ_G0026905	Pabpc4l	65	34.211
MGP_C3HHeJ_G0025858	Celf1	52	35.526	MGP_C3HHeJ_G0022870	Pabpc6	53	35.526
MGP_C3HHeJ_G0025858	Celf1	61	45.679	MGP_C3HHeJ_G0033028	Elavl1	83	45.679
MGP_C3HHeJ_G0025858	Celf1	100	80.082	MGP_C3HHeJ_G0025065	Celf2	100	88.060
MGP_C3HHeJ_G0025858	Celf1	70	39.535	MGP_C3HHeJ_G0028436	Pabpc4	68	33.333
MGP_C3HHeJ_G0025858	Celf1	97	43.320	MGP_C3HHeJ_G0027259	Celf3	99	43.830
MGP_C3HHeJ_G0025858	Celf1	98	45.135	MGP_C3HHeJ_G0034585	Celf6	91	45.549
MGP_C3HHeJ_G0025858	Celf1	57	43.590	MGP_C3HHeJ_G0034155	Elavl3	71	42.391
MGP_C3HHeJ_G0025858	Celf1	100	45.200	MGP_C3HHeJ_G0023942	Celf4	100	42.430