EuRBPDB

Description

Ensembl ID: MGP_C3HHeJ_G0025928 (Gene tree)
Gene ID: -
Gene Symbol: Caprin1
Alias: AL022980|Caprin-1|Gpiap|Gpiap1|Gpip137|M11s1|MMGPIP137|Mmgpip137|P137|RNG105|Rng105|caprin-1|rng105
Full Name: cell cycle associated protein 1
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Minus strand
Length: 37398 bases
Position: chr2:104485794-104523191
Accession: 1858234
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0056124	Caprin-1_C	PF12287.8	1.8e-136	1	1
MGP_C3HHeJ_P0056125	Caprin-1_C	PF12287.8	1.8e-136	1	1
MGP_C3HHeJ_P0056126	Caprin-1_C	PF12287.8	3.2e-90	1	1
MGP_C3HHeJ_P0056131	Caprin-1_C	PF12287.8	2.8e-25	1	1
MGP_C3HHeJ_P0056127	Caprin-1_C	PF12287.8	3.4e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0056124	-	6167	XM_006499902	MGP_C3HHeJ_P0056124	707 (aa)	XP_006499965	Q60865
MGP_C3HHeJ_T0056125	-	4067	-	MGP_C3HHeJ_P0056125	707 (aa)	-	-
MGP_C3HHeJ_T0056126	-	1923	-	MGP_C3HHeJ_P0056126	213 (aa)	-	-
MGP_C3HHeJ_T0056127	-	856	-	MGP_C3HHeJ_P0056127	93 (aa)	-	-
MGP_C3HHeJ_T0056133	-	479	-	-	- (aa)	-	-
MGP_C3HHeJ_T0056132	-	570	-	-	- (aa)	-	-
MGP_C3HHeJ_T0056131	-	760	-	MGP_C3HHeJ_P0056131	253 (aa)	-	-
MGP_C3HHeJ_T0056130	-	808	-	-	- (aa)	-	-
MGP_C3HHeJ_T0056128	-	816	-	-	- (aa)	-	-
MGP_C3HHeJ_T0056129	-	937	-	-	- (aa)	-	-
MGP_C3HHeJ_T0056136	-	828	-	-	- (aa)	-	-
MGP_C3HHeJ_T0056137	-	391	-	-	- (aa)	-	-
MGP_C3HHeJ_T0056134	-	879	-	-	- (aa)	-	-
MGP_C3HHeJ_T0056135	-	555	-	-	- (aa)	-	-
MGP_C3HHeJ_T0056138	-	626	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0025928	Caprin1	89	44.275	MGP_C3HHeJ_G0031209	Caprin2	91	38.415