EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0026527 (Gene tree)
Gene ID: -
Gene Symbol: Chd6
Alias: 5430439G14Rik|6330406J24Rik|CHD-6|Kiaa1335
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Minus strand
Length: 165927 bases
Position: chr2:164525090-164691016
Accession: 1918639
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0058663	ResIII	PF04851.15	4.2e-08	1	1
MGP_C3HHeJ_P0058659	ResIII	PF04851.15	2.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0058659	-	10515	XM_006500181	MGP_C3HHeJ_P0058659	2711 (aa)	XP_011238078	A3KFM7
MGP_C3HHeJ_T0058661	-	764	-	-	- (aa)	-	-
MGP_C3HHeJ_T0058660	-	736	-	-	- (aa)	-	-
MGP_C3HHeJ_T0058663	-	3608	-	MGP_C3HHeJ_P0058663	1183 (aa)	-	-
MGP_C3HHeJ_T0058662	-	3970	-	-	- (aa)	-	-
MGP_C3HHeJ_T0058665	-	3092	-	-	- (aa)	-	-
MGP_C3HHeJ_T0058664	-	601	-	-	- (aa)	-	-
MGP_C3HHeJ_T0058667	-	646	-	-	- (aa)	-	-
MGP_C3HHeJ_T0058666	-	616	-	-	- (aa)	-	-
MGP_C3HHeJ_T0058669	-	5051	-	-	- (aa)	-	-
MGP_C3HHeJ_T0058668	-	675	-	MGP_C3HHeJ_P0058668	217 (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0026527's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0026527	Chd6	61	37.625	MGP_C3HHeJ_G0032073	Chd2	63	32.583
MGP_C3HHeJ_G0026527	Chd6	66	36.621	MGP_C3HHeJ_G0028883	Chd5	51	34.657
MGP_C3HHeJ_G0026527	Chd6	84	72.837	MGP_C3HHeJ_G0027740	Chd7	72	64.905
MGP_C3HHeJ_G0026527	Chd6	84	71.227	MGP_C3HHeJ_G0033612	Chd9	74	61.717