EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0026623 (Gene tree)
Gene ID: -
Gene Symbol: Stau1
Alias: 5830401L18Rik|AW549911|C85792|Stau
Full Name: staufen (RNA binding protein) homolog 1 (Drosophila)
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Minus strand
Length: 60520 bases
Position: chr2:170835653-170896172
Accession: 1338864
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0059030	dsrm	PF00035.26	1.2e-26	1	2
MGP_C3HHeJ_P0059030	dsrm	PF00035.26	1.2e-26	2	2
MGP_C3HHeJ_P0059027	dsrm	PF00035.26	1.2e-26	1	2
MGP_C3HHeJ_P0059027	dsrm	PF00035.26	1.2e-26	2	2
MGP_C3HHeJ_P0059031	dsrm	PF00035.26	1.4e-26	1	2
MGP_C3HHeJ_P0059031	dsrm	PF00035.26	1.4e-26	2	2
MGP_C3HHeJ_P0059029	dsrm	PF00035.26	2.3e-23	1	2
MGP_C3HHeJ_P0059029	dsrm	PF00035.26	2.3e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0059028	-	3573	-	-	- (aa)	-	-
MGP_C3HHeJ_T0059029	-	2976	-	MGP_C3HHeJ_P0059029	495 (aa)	-	-
MGP_C3HHeJ_T0059033	-	1513	-	MGP_C3HHeJ_P0059033	436 (aa)	-	-
MGP_C3HHeJ_T0059032	-	774	-	-	- (aa)	-	-
MGP_C3HHeJ_T0059031	-	2860	-	MGP_C3HHeJ_P0059031	487 (aa)	-	-
MGP_C3HHeJ_T0059030	-	2840	-	MGP_C3HHeJ_P0059030	485 (aa)	-	-
MGP_C3HHeJ_T0059037	-	341	-	-	- (aa)	-	-
MGP_C3HHeJ_T0059036	-	788	-	-	- (aa)	-	-
MGP_C3HHeJ_T0059035	-	826	-	-	- (aa)	-	-
MGP_C3HHeJ_T0059027	-	3569	XM_006499071	MGP_C3HHeJ_P0059027	489 (aa)	XP_006499134	Q9Z108
MGP_C3HHeJ_T0059034	-	862	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0026623's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0026623	Stau1	52	31.395	MGP_C3HHeJ_G0025598	Prkra	53	31.395
MGP_C3HHeJ_G0026623	Stau1	86	48.055	MGP_C3HHeJ_G0015626	Stau2	85	48.046