EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0027046 (Gene tree)
Gene ID: -
Gene Symbol: Rbm46
Alias: EG633285|ENSMUSG00000033882|Gm761|LOC329687
Full Name: RNA binding motif protein 46
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Minus strand
Length: 39980 bases
Position: chr3:82110494-82150473
Accession: 3645057
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0060977	DND1_DSRM	PF14709.7	1.9e-27	1	1
MGP_C3HHeJ_P0060978	DND1_DSRM	PF14709.7	2.1e-27	1	1
MGP_C3HHeJ_P0060976	DND1_DSRM	PF14709.7	2.5e-27	1	1
MGP_C3HHeJ_P0060977	RRM_1	PF00076.22	8.8e-37	1	3
MGP_C3HHeJ_P0060977	RRM_1	PF00076.22	8.8e-37	2	3
MGP_C3HHeJ_P0060977	RRM_1	PF00076.22	8.8e-37	3	3
MGP_C3HHeJ_P0060978	RRM_1	PF00076.22	1e-36	1	3
MGP_C3HHeJ_P0060978	RRM_1	PF00076.22	1e-36	2	3
MGP_C3HHeJ_P0060978	RRM_1	PF00076.22	1e-36	3	3
MGP_C3HHeJ_P0060976	RRM_1	PF00076.22	1.5e-36	1	3
MGP_C3HHeJ_P0060976	RRM_1	PF00076.22	1.5e-36	2	3
MGP_C3HHeJ_P0060976	RRM_1	PF00076.22	1.5e-36	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0060978	-	2115	-	MGP_C3HHeJ_P0060978	485 (aa)	-	-
MGP_C3HHeJ_T0060976	-	1794	XM_006501849	MGP_C3HHeJ_P0060976	533 (aa)	XP_006501912	P86049
MGP_C3HHeJ_T0060977	-	2058	-	MGP_C3HHeJ_P0060977	470 (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0027046's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0027046	Rbm46	66	72.468	MGP_C3HHeJ_G0029287	Rbm47	94	73.649
MGP_C3HHeJ_G0027046	Rbm46	63	55.000	MGP_C3HHeJ_G0034790	Syncrip	53	54.333
MGP_C3HHeJ_G0027046	Rbm46	65	56.774	MGP_C3HHeJ_G0028662	Hnrnpr	59	56.329
MGP_C3HHeJ_G0027046	Rbm46	52	30.000	MGP_C3HHeJ_G0032780	Tial1	73	32.000
MGP_C3HHeJ_G0027046	Rbm46	88	70.064	MGP_C3HHeJ_G0024769	A1cf	96	70.064