EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0027115 (Gene tree)
Gene ID: -
Gene Symbol: Rab25
Alias: AV012978
Full Name: RAB25%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Minus strand
Length: 6480 bases
Position: chr3:88088792-88095271
Accession: 1858203
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0061286	MMR_HSR1	PF01926.23	5.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0061289	-	865	-	-	- (aa)	-	-
MGP_C3HHeJ_T0061288	-	301	-	-	- (aa)	-	-
MGP_C3HHeJ_T0061287	-	897	-	MGP_C3HHeJ_P0061287	138 (aa)	-	-
MGP_C3HHeJ_T0061286	-	1081	XM_011240163	MGP_C3HHeJ_P0061286	213 (aa)	-	Q9WTL2

Gene Model

Click here to download MGP_C3HHeJ_G0027115's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0027115's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0027115	Rab25	93	40.704	MGP_C3HHeJ_G0023612	Rab5a	90	40.704
MGP_C3HHeJ_G0027115	Rab25	92	31.683	MGP_C3HHeJ_G0015674	Rab23	85	31.683
MGP_C3HHeJ_G0027115	Rab25	79	43.275	MGP_C3HHeJ_G0035541	Rab39b	80	43.275
MGP_C3HHeJ_G0027115	Rab25	93	35.859	MGP_C3HHeJ_G0026677	Rab22a	97	35.859
MGP_C3HHeJ_G0027115	Rab25	79	45.833	MGP_C3HHeJ_G0017819	Rab1a	82	45.833
MGP_C3HHeJ_G0027115	Rab25	83	40.113	MGP_C3HHeJ_G0019120	Rab37	82	40.113
MGP_C3HHeJ_G0027115	Rab25	68	30.519	MGP_C3HHeJ_G0018521	Rab34	61	30.519
MGP_C3HHeJ_G0027115	Rab25	93	39.899	MGP_C3HHeJ_G0023702	Rab31	97	39.899
MGP_C3HHeJ_G0027115	Rab25	79	40.588	MGP_C3HHeJ_G0023711	Rab12	58	40.588
MGP_C3HHeJ_G0027115	Rab25	70	32.000	MGP_C3HHeJ_G0032911	Hras	85	33.333
MGP_C3HHeJ_G0027115	Rab25	79	43.529	MGP_C3HHeJ_G0023860	Rab18	82	43.529
MGP_C3HHeJ_G0027115	Rab25	80	47.368	MGP_C3HHeJ_G0027739	Rab2a	99	42.056
MGP_C3HHeJ_G0027115	Rab25	94	35.577	MGP_C3HHeJ_G0035785	Rab9b	98	35.577
MGP_C3HHeJ_G0027115	Rab25	96	41.546	MGP_C3HHeJ_G0032214	Rab30	97	41.546
MGP_C3HHeJ_G0027115	Rab25	96	42.439	MGP_C3HHeJ_G0024427	Rab1b	99	42.439
MGP_C3HHeJ_G0027115	Rab25	95	42.079	MGP_C3HHeJ_G0021035	Rab2b	99	42.079
MGP_C3HHeJ_G0027115	Rab25	54	43.590	MGP_C3HHeJ_G0017111	Rab36	68	38.122
MGP_C3HHeJ_G0027115	Rab25	76	38.323	MGP_C3HHeJ_G0026913	Rab33b	73	38.323
MGP_C3HHeJ_G0027115	Rab25	76	33.537	MGP_C3HHeJ_G0031183	Kras	98	31.746
MGP_C3HHeJ_G0027115	Rab25	93	32.323	MGP_C3HHeJ_G0034876	Rab6b	94	32.323
MGP_C3HHeJ_G0027115	Rab25	99	62.150	MGP_C3HHeJ_G0034626	Rab11a	95	70.748
MGP_C3HHeJ_G0027115	Rab25	80	48.235	MGP_C3HHeJ_G0025384	Rab14	93	48.227
MGP_C3HHeJ_G0027115	Rab25	93	41.089	MGP_C3HHeJ_G0018918	Rab5c	89	41.089
MGP_C3HHeJ_G0027115	Rab25	100	60.987	MGP_C3HHeJ_G0023261	Rab11b	100	60.987
MGP_C3HHeJ_G0027115	Rab25	76	45.963	MGP_C3HHeJ_G0017639	Rab5b	75	45.963
MGP_C3HHeJ_G0027115	Rab25	72	33.766	MGP_C3HHeJ_G0031289	Rasl2-9	70	33.766
MGP_C3HHeJ_G0027115	Rab25	86	34.239	MGP_C3HHeJ_G0032274	Rab6a	88	34.239
MGP_C3HHeJ_G0027115	Rab25	93	34.314	MGP_C3HHeJ_G0035937	Rab9	97	34.314
MGP_C3HHeJ_G0027115	Rab25	94	39.303	MGP_C3HHeJ_G0019609	Rab15	94	39.303
MGP_C3HHeJ_G0027115	Rab25	95	39.901	MGP_C3HHeJ_G0029670	Rab35	91	44.565
MGP_C3HHeJ_G0027115	Rab25	74	39.877	MGP_C3HHeJ_G0035367	Rab33a	69	39.877
MGP_C3HHeJ_G0027115	Rab25	70	33.333	MGP_C3HHeJ_G0027390	Nras	95	33.793
MGP_C3HHeJ_G0027115	Rab25	74	30.380	MGP_C3HHeJ_G0021976	Rabl2	69	30.380
MGP_C3HHeJ_G0027115	Rab25	75	39.157	MGP_C3HHeJ_G0030726	Rab7	91	44.944