EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0027259 (Gene tree)
Gene ID: -
Gene Symbol: Celf3
Alias: 4930415M08Rik|BRUNOL1|CAGH4|ERDA4|Tnrc4
Full Name: CUGBP%2C Elav-like family member 3
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Plus strand
Length: 14891 bases
Position: chr3:94564816-94579706
Accession: 1926034
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0061867	RRM_1	PF00076.22	9.2e-54	1	3
MGP_C3HHeJ_P0061867	RRM_1	PF00076.22	9.2e-54	2	3
MGP_C3HHeJ_P0061867	RRM_1	PF00076.22	9.2e-54	3	3
MGP_C3HHeJ_P0061866	RRM_1	PF00076.22	1.5e-53	1	3
MGP_C3HHeJ_P0061866	RRM_1	PF00076.22	1.5e-53	2	3
MGP_C3HHeJ_P0061866	RRM_1	PF00076.22	1.5e-53	3	3
MGP_C3HHeJ_P0061868	RRM_1	PF00076.22	2e-53	1	3
MGP_C3HHeJ_P0061868	RRM_1	PF00076.22	2e-53	2	3
MGP_C3HHeJ_P0061868	RRM_1	PF00076.22	2e-53	3	3
MGP_C3HHeJ_P0061873	RRM_1	PF00076.22	6.8e-16	1	1
MGP_C3HHeJ_P0061874	RRM_1	PF00076.22	1.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0061874	-	726	-	MGP_C3HHeJ_P0061874	231 (aa)	-	-
MGP_C3HHeJ_T0061875	-	3378	-	-	- (aa)	-	-
MGP_C3HHeJ_T0061869	-	1193	-	-	- (aa)	-	-
MGP_C3HHeJ_T0061868	-	4099	-	MGP_C3HHeJ_P0061868	494 (aa)	-	-
MGP_C3HHeJ_T0061876	-	889	-	-	- (aa)	-	-
MGP_C3HHeJ_T0061870	-	669	-	-	- (aa)	-	-
MGP_C3HHeJ_T0061871	-	2446	-	-	- (aa)	-	-
MGP_C3HHeJ_T0061872	-	2937	-	-	- (aa)	-	-
MGP_C3HHeJ_T0061873	-	779	-	MGP_C3HHeJ_P0061873	182 (aa)	-	-
MGP_C3HHeJ_T0061867	-	2356	-	MGP_C3HHeJ_P0061867	416 (aa)	-	-
MGP_C3HHeJ_T0061866	-	2749	-	MGP_C3HHeJ_P0061866	465 (aa)	-	-
MGP_C3HHeJ_T0061865	-	365	XM_006502323	MGP_C3HHeJ_P0061865	31 (aa)	XP_006502386	Q8CIN6
MGP_C3HHeJ_T0061877	-	855	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C3HHeJ_G0027259's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0027259's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0027259	Celf3	99	43.830	MGP_C3HHeJ_G0025858	Celf1	97	43.320
MGP_C3HHeJ_G0027259	Celf3	67	32.857	MGP_C3HHeJ_G0026551	Pabpc1l	57	34.118
MGP_C3HHeJ_G0027259	Celf3	61	40.741	MGP_C3HHeJ_G0028272	Elavl4	85	40.741
MGP_C3HHeJ_G0027259	Celf3	81	87.368	MGP_C3HHeJ_G0034585	Celf6	75	85.526
MGP_C3HHeJ_G0027259	Celf3	90	55.801	MGP_C3HHeJ_G0025065	Celf2	94	83.333
MGP_C3HHeJ_G0027259	Celf3	80	37.500	MGP_C3HHeJ_G0022870	Pabpc6	72	36.585
MGP_C3HHeJ_G0027259	Celf3	98	35.632	MGP_C3HHeJ_G0033028	Elavl1	95	44.444
MGP_C3HHeJ_G0027259	Celf3	70	34.091	MGP_C3HHeJ_G0032780	Tial1	81	37.333
MGP_C3HHeJ_G0027259	Celf3	100	67.213	MGP_C3HHeJ_G0017323	Celf5	89	63.920
MGP_C3HHeJ_G0027259	Celf3	63	41.975	MGP_C3HHeJ_G0028138	Elavl2	76	41.975
MGP_C3HHeJ_G0027259	Celf3	91	39.474	MGP_C3HHeJ_G0035085	Rbms3	76	39.474
MGP_C3HHeJ_G0027259	Celf3	100	69.072	MGP_C3HHeJ_G0023942	Celf4	100	63.275
MGP_C3HHeJ_G0027259	Celf3	77	37.805	MGP_C3HHeJ_G0030756	Tia1	93	38.667
MGP_C3HHeJ_G0027259	Celf3	98	35.632	MGP_C3HHeJ_G0034155	Elavl3	89	34.940
MGP_C3HHeJ_G0027259	Celf3	69	33.784	MGP_C3HHeJ_G0028436	Pabpc4	67	32.394