EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0027689 (Gene tree)
Gene ID: -
Gene Symbol: Fubp1
Alias: 9530027K12Rik|D3Ertd330e|FBP|Fubp|Fubp4
Full Name: far upstream element (FUSE) binding protein 1
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Plus strand
Length: 26447 bases
Position: chr3:154806535-154832981
Accession: 1196294
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0063960	KH_1	PF00013.29	7.2e-70	1	4
MGP_C3HHeJ_P0063960	KH_1	PF00013.29	7.2e-70	2	4
MGP_C3HHeJ_P0063960	KH_1	PF00013.29	7.2e-70	3	4
MGP_C3HHeJ_P0063960	KH_1	PF00013.29	7.2e-70	4	4
MGP_C3HHeJ_P0063957	KH_1	PF00013.29	2.2e-69	1	4
MGP_C3HHeJ_P0063957	KH_1	PF00013.29	2.2e-69	2	4
MGP_C3HHeJ_P0063957	KH_1	PF00013.29	2.2e-69	3	4
MGP_C3HHeJ_P0063957	KH_1	PF00013.29	2.2e-69	4	4
MGP_C3HHeJ_P0063963	KH_1	PF00013.29	2.2e-69	1	4
MGP_C3HHeJ_P0063963	KH_1	PF00013.29	2.2e-69	2	4
MGP_C3HHeJ_P0063963	KH_1	PF00013.29	2.2e-69	3	4
MGP_C3HHeJ_P0063963	KH_1	PF00013.29	2.2e-69	4	4
MGP_C3HHeJ_P0063961	KH_1	PF00013.29	2.4e-69	1	4
MGP_C3HHeJ_P0063961	KH_1	PF00013.29	2.4e-69	2	4
MGP_C3HHeJ_P0063961	KH_1	PF00013.29	2.4e-69	3	4
MGP_C3HHeJ_P0063961	KH_1	PF00013.29	2.4e-69	4	4
MGP_C3HHeJ_P0063959	KH_1	PF00013.29	2.4e-69	1	4
MGP_C3HHeJ_P0063959	KH_1	PF00013.29	2.4e-69	2	4
MGP_C3HHeJ_P0063959	KH_1	PF00013.29	2.4e-69	3	4
MGP_C3HHeJ_P0063959	KH_1	PF00013.29	2.4e-69	4	4
MGP_C3HHeJ_P0063958	KH_1	PF00013.29	7.6e-38	1	2
MGP_C3HHeJ_P0063958	KH_1	PF00013.29	7.6e-38	2	2
MGP_C3HHeJ_P0063967	KH_1	PF00013.29	1.1e-16	1	1
MGP_C3HHeJ_P0063960	KH_2	PF07650.17	1.3e-22	1	2
MGP_C3HHeJ_P0063960	KH_2	PF07650.17	1.3e-22	2	2
MGP_C3HHeJ_P0063963	KH_2	PF07650.17	3.4e-22	1	2
MGP_C3HHeJ_P0063963	KH_2	PF07650.17	3.4e-22	2	2
MGP_C3HHeJ_P0063961	KH_2	PF07650.17	3.6e-22	1	2
MGP_C3HHeJ_P0063961	KH_2	PF07650.17	3.6e-22	2	2
MGP_C3HHeJ_P0063959	KH_2	PF07650.17	3.7e-22	1	2
MGP_C3HHeJ_P0063959	KH_2	PF07650.17	3.7e-22	2	2
MGP_C3HHeJ_P0063957	KH_2	PF07650.17	3.7e-22	1	2
MGP_C3HHeJ_P0063957	KH_2	PF07650.17	3.7e-22	2	2
MGP_C3HHeJ_P0063958	KH_2	PF07650.17	3.8e-10	1	1
MGP_C3HHeJ_P0063967	KH_2	PF07650.17	5.2e-06	1	1
MGP_C3HHeJ_P0063971	DUF1897	PF09005.10	1.7e-12	1	2
MGP_C3HHeJ_P0063971	DUF1897	PF09005.10	1.7e-12	2	2
MGP_C3HHeJ_P0063969	DUF1897	PF09005.10	2.1e-12	1	2
MGP_C3HHeJ_P0063969	DUF1897	PF09005.10	2.1e-12	2	2
MGP_C3HHeJ_P0063957	DUF1897	PF09005.10	2.4e-11	1	2
MGP_C3HHeJ_P0063957	DUF1897	PF09005.10	2.4e-11	2	2
MGP_C3HHeJ_P0063963	DUF1897	PF09005.10	2.5e-11	1	2
MGP_C3HHeJ_P0063963	DUF1897	PF09005.10	2.5e-11	2	2
MGP_C3HHeJ_P0063961	DUF1897	PF09005.10	2.6e-11	1	2
MGP_C3HHeJ_P0063961	DUF1897	PF09005.10	2.6e-11	2	2
MGP_C3HHeJ_P0063959	DUF1897	PF09005.10	2.6e-11	1	2
MGP_C3HHeJ_P0063959	DUF1897	PF09005.10	2.6e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0063973	-	424	-	-	- (aa)	-	-
MGP_C3HHeJ_T0063970	-	800	-	MGP_C3HHeJ_P0063970	173 (aa)	-	-
MGP_C3HHeJ_T0063971	-	826	-	MGP_C3HHeJ_P0063971	156 (aa)	-	-
MGP_C3HHeJ_T0063965	-	4528	-	MGP_C3HHeJ_P0063965	643 (aa)	-	-
MGP_C3HHeJ_T0063968	-	512	-	-	- (aa)	-	-
MGP_C3HHeJ_T0063969	-	796	-	MGP_C3HHeJ_P0063969	141 (aa)	-	-
MGP_C3HHeJ_T0063974	-	4032	-	-	- (aa)	-	-
MGP_C3HHeJ_T0063959	-	2555	-	MGP_C3HHeJ_P0063959	655 (aa)	-	-
MGP_C3HHeJ_T0063958	-	1043	-	MGP_C3HHeJ_P0063958	307 (aa)	-	-
MGP_C3HHeJ_T0063975	-	665	-	-	- (aa)	-	-
MGP_C3HHeJ_T0063972	-	5099	-	-	- (aa)	-	-
MGP_C3HHeJ_T0063960	-	3166	-	MGP_C3HHeJ_P0063960	524 (aa)	-	-
MGP_C3HHeJ_T0063961	-	2529	-	MGP_C3HHeJ_P0063961	652 (aa)	-	-
MGP_C3HHeJ_T0063957	-	6543	XM_006501660	MGP_C3HHeJ_P0063957	643 (aa)	XP_006501723	Q91WJ8
MGP_C3HHeJ_T0063963	-	2377	-	MGP_C3HHeJ_P0063963	644 (aa)	-	-
MGP_C3HHeJ_T0063964	-	4866	-	MGP_C3HHeJ_P0063964	701 (aa)	-	-
MGP_C3HHeJ_T0063962	-	2095	-	MGP_C3HHeJ_P0063962	70 (aa)	-	-
MGP_C3HHeJ_T0063966	-	432	-	-	- (aa)	-	-
MGP_C3HHeJ_T0063967	-	585	-	MGP_C3HHeJ_P0063967	149 (aa)	-	-

Gene Model

Click here to download MGP_C3HHeJ_G0027689's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0027689's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0027689	Fubp1	94	59.208	MGP_C3HHeJ_G0025321	Fubp3	96	64.324
MGP_C3HHeJ_G0027689	Fubp1	53	34.615	MGP_C3HHeJ_G0020382	Hnrnpk	56	34.615
MGP_C3HHeJ_G0027689	Fubp1	71	33.019	MGP_C3HHeJ_G0017151	Pcbp3	66	31.250
MGP_C3HHeJ_G0027689	Fubp1	50	36.364	MGP_C3HHeJ_G0019460	Nova1	57	36.364
MGP_C3HHeJ_G0027689	Fubp1	61	36.765	MGP_C3HHeJ_G0031452	-	54	36.765
MGP_C3HHeJ_G0027689	Fubp1	72	34.524	MGP_C3HHeJ_G0034915	-	76	33.684
MGP_C3HHeJ_G0027689	Fubp1	96	64.410	MGP_C3HHeJ_G0023672	Khsrp	70	67.654
MGP_C3HHeJ_G0027689	Fubp1	69	30.168	MGP_C3HHeJ_G0031451	-	53	36.765