EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0028272 (Gene tree)
Gene ID: -
Gene Symbol: Elavl4
Alias: Elav|Hud|PNEM
Full Name: ELAV (embryonic lethal%2C abnormal vision%2C Drosophila)-like 4 (Hu antigen D)
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Minus strand
Length: 154103 bases
Position: chr4:110422888-110576990
Accession: 107427
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0066595	RRM_5	PF13893.6	2.8e-13	1	2
MGP_C3HHeJ_P0066595	RRM_5	PF13893.6	2.8e-13	2	2
MGP_C3HHeJ_P0066591	RRM_5	PF13893.6	3.1e-13	1	2
MGP_C3HHeJ_P0066591	RRM_5	PF13893.6	3.1e-13	2	2
MGP_C3HHeJ_P0066596	RRM_5	PF13893.6	3.2e-13	1	2
MGP_C3HHeJ_P0066596	RRM_5	PF13893.6	3.2e-13	2	2
MGP_C3HHeJ_P0066592	RRM_5	PF13893.6	3.4e-13	1	2
MGP_C3HHeJ_P0066592	RRM_5	PF13893.6	3.4e-13	2	2
MGP_C3HHeJ_P0066593	RRM_5	PF13893.6	3.6e-13	1	2
MGP_C3HHeJ_P0066593	RRM_5	PF13893.6	3.6e-13	2	2
MGP_C3HHeJ_P0066597	RRM_5	PF13893.6	3.9e-13	1	2
MGP_C3HHeJ_P0066597	RRM_5	PF13893.6	3.9e-13	2	2
MGP_C3HHeJ_P0066594	RRM_5	PF13893.6	3.9e-13	1	2
MGP_C3HHeJ_P0066594	RRM_5	PF13893.6	3.9e-13	2	2
MGP_C3HHeJ_P0066595	RRM_1	PF00076.22	2.1e-65	1	3
MGP_C3HHeJ_P0066595	RRM_1	PF00076.22	2.1e-65	2	3
MGP_C3HHeJ_P0066595	RRM_1	PF00076.22	2.1e-65	3	3
MGP_C3HHeJ_P0066596	RRM_1	PF00076.22	2.4e-65	1	3
MGP_C3HHeJ_P0066596	RRM_1	PF00076.22	2.4e-65	2	3
MGP_C3HHeJ_P0066596	RRM_1	PF00076.22	2.4e-65	3	3
MGP_C3HHeJ_P0066591	RRM_1	PF00076.22	2.4e-65	1	3
MGP_C3HHeJ_P0066591	RRM_1	PF00076.22	2.4e-65	2	3
MGP_C3HHeJ_P0066591	RRM_1	PF00076.22	2.4e-65	3	3
MGP_C3HHeJ_P0066592	RRM_1	PF00076.22	2.5e-65	1	3
MGP_C3HHeJ_P0066592	RRM_1	PF00076.22	2.5e-65	2	3
MGP_C3HHeJ_P0066592	RRM_1	PF00076.22	2.5e-65	3	3
MGP_C3HHeJ_P0066593	RRM_1	PF00076.22	2.9e-65	1	3
MGP_C3HHeJ_P0066593	RRM_1	PF00076.22	2.9e-65	2	3
MGP_C3HHeJ_P0066593	RRM_1	PF00076.22	2.9e-65	3	3
MGP_C3HHeJ_P0066597	RRM_1	PF00076.22	2.9e-65	1	3
MGP_C3HHeJ_P0066597	RRM_1	PF00076.22	2.9e-65	2	3
MGP_C3HHeJ_P0066597	RRM_1	PF00076.22	2.9e-65	3	3
MGP_C3HHeJ_P0066594	RRM_1	PF00076.22	3e-65	1	3
MGP_C3HHeJ_P0066594	RRM_1	PF00076.22	3e-65	2	3
MGP_C3HHeJ_P0066594	RRM_1	PF00076.22	3e-65	3	3
MGP_C3HHeJ_P0066599	RRM_1	PF00076.22	1.2e-20	1	1
MGP_C3HHeJ_P0066601	RRM_1	PF00076.22	6.8e-13	1	1
MGP_C3HHeJ_P0066602	RRM_1	PF00076.22	9.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0066602	-	488	-	MGP_C3HHeJ_P0066602	92 (aa)	-	-
MGP_C3HHeJ_T0066600	-	464	-	-	- (aa)	-	-
MGP_C3HHeJ_T0066601	-	663	-	MGP_C3HHeJ_P0066601	94 (aa)	-	-
MGP_C3HHeJ_T0066592	-	4106	-	MGP_C3HHeJ_P0066592	371 (aa)	-	-
MGP_C3HHeJ_T0066593	-	4023	-	MGP_C3HHeJ_P0066593	380 (aa)	-	-
MGP_C3HHeJ_T0066591	-	3996	XM_006502793	MGP_C3HHeJ_P0066591	366 (aa)	XP_006502856	Q61701
MGP_C3HHeJ_T0066596	-	3774	-	MGP_C3HHeJ_P0066596	366 (aa)	-	-
MGP_C3HHeJ_T0066597	-	3798	-	MGP_C3HHeJ_P0066597	383 (aa)	-	-
MGP_C3HHeJ_T0066594	-	4148	-	MGP_C3HHeJ_P0066594	385 (aa)	-	-
MGP_C3HHeJ_T0066595	-	3760	-	MGP_C3HHeJ_P0066595	356 (aa)	-	-
MGP_C3HHeJ_T0066598	-	869	-	-	- (aa)	-	-
MGP_C3HHeJ_T0066599	-	644	-	MGP_C3HHeJ_P0066599	137 (aa)	-	-

Gene Model

Click here to download MGP_C3HHeJ_G0028272's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0028272's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0028272	Elavl4	85	40.741	MGP_C3HHeJ_G0027259	Celf3	61	40.741
MGP_C3HHeJ_G0028272	Elavl4	90	30.625	MGP_C3HHeJ_G0028436	Pabpc4	98	35.294
MGP_C3HHeJ_G0028272	Elavl4	74	33.708	MGP_C3HHeJ_G0035420	Rbmx	86	33.708
MGP_C3HHeJ_G0028272	Elavl4	89	33.735	MGP_C3HHeJ_G0026551	Pabpc1l	62	33.735
MGP_C3HHeJ_G0028272	Elavl4	85	40.741	MGP_C3HHeJ_G0034585	Celf6	95	35.802
MGP_C3HHeJ_G0028272	Elavl4	70	35.484	MGP_C3HHeJ_G0026905	Pabpc4l	96	30.065
MGP_C3HHeJ_G0028272	Elavl4	88	34.940	MGP_C3HHeJ_G0024102	Pabpc2	59	34.940
MGP_C3HHeJ_G0028272	Elavl4	72	35.821	MGP_C3HHeJ_G0030416	Tra2a	59	37.097
MGP_C3HHeJ_G0028272	Elavl4	70	36.458	MGP_C3HHeJ_G0025496	Rbms1	53	32.773
MGP_C3HHeJ_G0028272	Elavl4	57	37.037	MGP_C3HHeJ_G0029790	Snrnp35	59	33.803
MGP_C3HHeJ_G0028272	Elavl4	70	36.458	MGP_C3HHeJ_G0035085	Rbms3	83	37.097
MGP_C3HHeJ_G0028272	Elavl4	81	38.272	MGP_C3HHeJ_G0025065	Celf2	61	38.272
MGP_C3HHeJ_G0028272	Elavl4	58	31.646	MGP_C3HHeJ_G0035223	Rbm3	82	38.710
MGP_C3HHeJ_G0028272	Elavl4	88	32.468	MGP_C3HHeJ_G0022870	Pabpc6	60	32.468
MGP_C3HHeJ_G0028272	Elavl4	89	73.585	MGP_C3HHeJ_G0033028	Elavl1	98	73.585
MGP_C3HHeJ_G0028272	Elavl4	78	30.088	MGP_C3HHeJ_G0018679	Msi2	84	30.208
MGP_C3HHeJ_G0028272	Elavl4	66	42.373	MGP_C3HHeJ_G0017255	Dazap1	64	30.275
MGP_C3HHeJ_G0028272	Elavl4	88	36.145	MGP_C3HHeJ_G0021538	Pabpc1	58	36.145
MGP_C3HHeJ_G0028272	Elavl4	88	35.897	MGP_C3HHeJ_G0032780	Tial1	73	35.897
MGP_C3HHeJ_G0028272	Elavl4	99	79.893	MGP_C3HHeJ_G0034155	Elavl3	99	80.323
MGP_C3HHeJ_G0028272	Elavl4	54	33.784	MGP_C3HHeJ_G0027328	Rbm8a	62	30.693
MGP_C3HHeJ_G0028272	Elavl4	99	89.315	MGP_C3HHeJ_G0028138	Elavl2	100	89.751
MGP_C3HHeJ_G0028272	Elavl4	78	40.741	MGP_C3HHeJ_G0025858	Celf1	62	40.741
MGP_C3HHeJ_G0028272	Elavl4	94	35.897	MGP_C3HHeJ_G0030756	Tia1	98	32.895
MGP_C3HHeJ_G0028272	Elavl4	70	38.889	MGP_C3HHeJ_G0017249	Cirbp	84	38.889
MGP_C3HHeJ_G0028272	Elavl4	88	38.272	MGP_C3HHeJ_G0023942	Celf4	91	35.802