EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0028314 (Gene tree)
Gene ID: -
Gene Symbol: Rad54l
Alias: RAD54|Rad54
Full Name: RAD54 like (S. cerevisiae)
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Minus strand
Length: 29770 bases
Position: chr4:116478478-116508247
Accession: 894697
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0066771	ResIII	PF04851.15	2.2e-09	1	1
MGP_C3HHeJ_P0066772	ResIII	PF04851.15	2.2e-09	1	1
MGP_C3HHeJ_P0066771	DEAD	PF00270.29	9e-07	1	1
MGP_C3HHeJ_P0066772	DEAD	PF00270.29	9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0066772	-	3025	-	MGP_C3HHeJ_P0066772	747 (aa)	-	-
MGP_C3HHeJ_T0066773	-	654	-	-	- (aa)	-	-
MGP_C3HHeJ_T0066770	-	4571	-	-	- (aa)	-	-
MGP_C3HHeJ_T0066771	-	2780	-	MGP_C3HHeJ_P0066771	747 (aa)	-	-
MGP_C3HHeJ_T0066774	-	209	-	-	- (aa)	-	-
MGP_C3HHeJ_T0066775	-	1511	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C3HHeJ_G0028314's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0028314's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0028314	Rad54l	66	33.267	MGP_C3HHeJ_G0035357	Smarca1	61	32.031
MGP_C3HHeJ_G0028314	Rad54l	66	30.112	MGP_C3HHeJ_G0030905	Smarcad1	50	30.112
MGP_C3HHeJ_G0028314	Rad54l	66	30.785	MGP_C3HHeJ_G0027345	Chd1l	50	30.584
MGP_C3HHeJ_G0028314	Rad54l	88	44.748	MGP_C3HHeJ_G0027753	Rad54b	76	44.748