EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0028549 (Gene tree)
Gene ID: -
Gene Symbol: Pum1
Alias: AA517475|Kiaa0099|Pumm|mKIAA0099
Full Name: pumilio RNA-binding family member 1
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Plus strand
Length: 121789 bases
Position: chr4:130988877-131110665
Accession: 1931749
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0067809	PUF	PF00806.19	3.2e-70	1	8
MGP_C3HHeJ_P0067809	PUF	PF00806.19	3.2e-70	2	8
MGP_C3HHeJ_P0067809	PUF	PF00806.19	3.2e-70	3	8
MGP_C3HHeJ_P0067809	PUF	PF00806.19	3.2e-70	4	8
MGP_C3HHeJ_P0067809	PUF	PF00806.19	3.2e-70	5	8
MGP_C3HHeJ_P0067809	PUF	PF00806.19	3.2e-70	6	8
MGP_C3HHeJ_P0067809	PUF	PF00806.19	3.2e-70	7	8
MGP_C3HHeJ_P0067809	PUF	PF00806.19	3.2e-70	8	8
MGP_C3HHeJ_P0067813	PUF	PF00806.19	2.4e-69	1	8
MGP_C3HHeJ_P0067813	PUF	PF00806.19	2.4e-69	2	8
MGP_C3HHeJ_P0067813	PUF	PF00806.19	2.4e-69	3	8
MGP_C3HHeJ_P0067813	PUF	PF00806.19	2.4e-69	4	8
MGP_C3HHeJ_P0067813	PUF	PF00806.19	2.4e-69	5	8
MGP_C3HHeJ_P0067813	PUF	PF00806.19	2.4e-69	6	8
MGP_C3HHeJ_P0067813	PUF	PF00806.19	2.4e-69	7	8
MGP_C3HHeJ_P0067813	PUF	PF00806.19	2.4e-69	8	8
MGP_C3HHeJ_P0067810	PUF	PF00806.19	2.8e-69	1	8
MGP_C3HHeJ_P0067810	PUF	PF00806.19	2.8e-69	2	8
MGP_C3HHeJ_P0067810	PUF	PF00806.19	2.8e-69	3	8
MGP_C3HHeJ_P0067810	PUF	PF00806.19	2.8e-69	4	8
MGP_C3HHeJ_P0067810	PUF	PF00806.19	2.8e-69	5	8
MGP_C3HHeJ_P0067810	PUF	PF00806.19	2.8e-69	6	8
MGP_C3HHeJ_P0067810	PUF	PF00806.19	2.8e-69	7	8
MGP_C3HHeJ_P0067810	PUF	PF00806.19	2.8e-69	8	8
MGP_C3HHeJ_P0067814	PUF	PF00806.19	5.9e-69	1	8
MGP_C3HHeJ_P0067814	PUF	PF00806.19	5.9e-69	2	8
MGP_C3HHeJ_P0067814	PUF	PF00806.19	5.9e-69	3	8
MGP_C3HHeJ_P0067814	PUF	PF00806.19	5.9e-69	4	8
MGP_C3HHeJ_P0067814	PUF	PF00806.19	5.9e-69	5	8
MGP_C3HHeJ_P0067814	PUF	PF00806.19	5.9e-69	6	8
MGP_C3HHeJ_P0067814	PUF	PF00806.19	5.9e-69	7	8
MGP_C3HHeJ_P0067814	PUF	PF00806.19	5.9e-69	8	8
MGP_C3HHeJ_P0067808	PUF	PF00806.19	5.9e-69	1	8
MGP_C3HHeJ_P0067808	PUF	PF00806.19	5.9e-69	2	8
MGP_C3HHeJ_P0067808	PUF	PF00806.19	5.9e-69	3	8
MGP_C3HHeJ_P0067808	PUF	PF00806.19	5.9e-69	4	8
MGP_C3HHeJ_P0067808	PUF	PF00806.19	5.9e-69	5	8
MGP_C3HHeJ_P0067808	PUF	PF00806.19	5.9e-69	6	8
MGP_C3HHeJ_P0067808	PUF	PF00806.19	5.9e-69	7	8
MGP_C3HHeJ_P0067808	PUF	PF00806.19	5.9e-69	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0067809	-	4615	-	MGP_C3HHeJ_P0067809	944 (aa)	-	-
MGP_C3HHeJ_T0067808	-	5390	XM_006539291	MGP_C3HHeJ_P0067808	1189 (aa)	XP_006539354	Q80U78
MGP_C3HHeJ_T0067810	-	5059	-	MGP_C3HHeJ_P0067810	1092 (aa)	-	-
MGP_C3HHeJ_T0067811	-	1273	-	-	- (aa)	-	-
MGP_C3HHeJ_T0067812	-	693	-	MGP_C3HHeJ_P0067812	218 (aa)	-	-
MGP_C3HHeJ_T0067813	-	4017	-	MGP_C3HHeJ_P0067813	1186 (aa)	-	-
MGP_C3HHeJ_T0067814	-	3991	-	MGP_C3HHeJ_P0067814	1188 (aa)	-	-

Gene Model

Click here to download MGP_C3HHeJ_G0028549's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0028549's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0028549	Pum1	86	87.294	MGP_C3HHeJ_G0019335	Pum2	100	88.835