EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_C3HHeJ_G0028564 (Gene tree)
Gene ID
-
Gene Symbol
Trnau1ap
Alias
1110007F05Rik|AA387999|SECp43|Secp43|Trspap1|WI1-2643G14.2
Full Name
tRNA selenocysteine 1 associated protein 1
Gene Type
protein_coding
Species
Mus_musculus_c3hhej
Status
putative
Strand
Minus strand
Length
19775 bases
Position
chr4:132743623-132763397
Accession
1919037
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_C3HHeJ_P0067889RRM_1PF00076.229.8e-2712
MGP_C3HHeJ_P0067889RRM_1PF00076.229.8e-2722
MGP_C3HHeJ_P0067890RRM_1PF00076.223.3e-1711
MGP_C3HHeJ_P0067894RRM_1PF00076.221.6e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_C3HHeJ_T0067900-621--- (aa)--
MGP_C3HHeJ_T0067890-961-MGP_C3HHeJ_P0067890247 (aa)--
MGP_C3HHeJ_T0067891-1791--- (aa)--
MGP_C3HHeJ_T0067892-650--- (aa)--
MGP_C3HHeJ_T0067893-1017-MGP_C3HHeJ_P006789386 (aa)--
MGP_C3HHeJ_T0067894-474-MGP_C3HHeJ_P0067894146 (aa)--
MGP_C3HHeJ_T0067895-600-MGP_C3HHeJ_P006789547 (aa)--
MGP_C3HHeJ_T0067896-553--- (aa)--
MGP_C3HHeJ_T0067897-663-MGP_C3HHeJ_P006789749 (aa)--
MGP_C3HHeJ_T0067898-679--- (aa)--
MGP_C3HHeJ_T0067899-371-MGP_C3HHeJ_P006789970 (aa)--
MGP_C3HHeJ_T0067889-1130XM_011250332MGP_C3HHeJ_P0067889287 (aa)XP_011248634Q80VC6
Gene Model
Click here to download MGP_C3HHeJ_G0028564's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0028564's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_C3HHeJ_G0028564Trnau1ap7930.198MGP_C3HHeJ_G0030756Tia16031.285
MGP_C3HHeJ_G0028564Trnau1ap8834.211MGP_C3HHeJ_G0026905Pabpc4l8931.875
MGP_C3HHeJ_G0028564Trnau1ap6032.386MGP_C3HHeJ_G0032780Tial17333.019
MGP_C3HHeJ_G0028564Trnau1ap9830.952MGP_C3HHeJ_G0028138Elavl26630.952

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