EuRBPDB

Description

Ensembl ID: MGP_C3HHeJ_G0028662 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpr
Alias: 2610003J05Rik|2610528B01Rik|Hnrpr|Hnrpr {ECO:0000313|EMBL:AAH38051.1,GN ECO:0000313|MGI:MGI:1891692}|hnRNPR
Full Name: heterogeneous nuclear ribonucleoprotein R
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Plus strand
Length: 50022 bases
Position: chr4:137060568-137110589
Accession: 1891692
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0068324	RRM_1	PF00076.22	2.6e-43	1	3
MGP_C3HHeJ_P0068324	RRM_1	PF00076.22	2.6e-43	2	3
MGP_C3HHeJ_P0068324	RRM_1	PF00076.22	2.6e-43	3	3
MGP_C3HHeJ_P0068327	RRM_1	PF00076.22	2.6e-43	1	3
MGP_C3HHeJ_P0068327	RRM_1	PF00076.22	2.6e-43	2	3
MGP_C3HHeJ_P0068327	RRM_1	PF00076.22	2.6e-43	3	3
MGP_C3HHeJ_P0068325	RRM_1	PF00076.22	3.4e-43	1	3
MGP_C3HHeJ_P0068325	RRM_1	PF00076.22	3.4e-43	2	3
MGP_C3HHeJ_P0068325	RRM_1	PF00076.22	3.4e-43	3	3
MGP_C3HHeJ_P0068326	RRM_1	PF00076.22	3.9e-43	1	3
MGP_C3HHeJ_P0068326	RRM_1	PF00076.22	3.9e-43	2	3
MGP_C3HHeJ_P0068326	RRM_1	PF00076.22	3.9e-43	3	3
MGP_C3HHeJ_P0068330	RRM_1	PF00076.22	5.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0068334	-	1915	-	-	- (aa)	-	-
MGP_C3HHeJ_T0068329	-	576	-	MGP_C3HHeJ_P0068329	72 (aa)	-	-
MGP_C3HHeJ_T0068328	-	859	-	MGP_C3HHeJ_P0068328	103 (aa)	-	-
MGP_C3HHeJ_T0068330	-	980	-	MGP_C3HHeJ_P0068330	270 (aa)	-	-
MGP_C3HHeJ_T0068331	-	292	-	MGP_C3HHeJ_P0068331	73 (aa)	-	-
MGP_C3HHeJ_T0068332	-	473	-	-	- (aa)	-	-
MGP_C3HHeJ_T0068333	-	3806	-	-	- (aa)	-	-
MGP_C3HHeJ_T0068327	-	2707	-	MGP_C3HHeJ_P0068327	551 (aa)	-	-
MGP_C3HHeJ_T0068326	-	2743	-	MGP_C3HHeJ_P0068326	652 (aa)	-	-
MGP_C3HHeJ_T0068325	-	21328	-	MGP_C3HHeJ_P0068325	632 (aa)	-	-
MGP_C3HHeJ_T0068324	-	2603	XM_006539221	MGP_C3HHeJ_P0068324	551 (aa)	XP_006539284	A2AW40

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0028662	Hnrnpr	54	57.823	MGP_C3HHeJ_G0024769	A1cf	52	53.896
MGP_C3HHeJ_G0028662	Hnrnpr	73	48.642	MGP_C3HHeJ_G0029287	Rbm47	88	59.859
MGP_C3HHeJ_G0028662	Hnrnpr	59	56.329	MGP_C3HHeJ_G0027046	Rbm46	65	56.774
MGP_C3HHeJ_G0028662	Hnrnpr	99	81.716	MGP_C3HHeJ_G0034790	Syncrip	99	79.841
MGP_C3HHeJ_G0028662	Hnrnpr	57	37.908	MGP_C3HHeJ_G0024023	Dnd1	62	33.040