EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0028746 (Gene tree)
Gene ID: -
Gene Symbol: Zbtb17
Alias: AA589413|Lp-1|Miz1|Zfp100|Znf151|mZ13
Full Name: zinc finger and BTB domain containing 17
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Plus strand
Length: 24789 bases
Position: chr4:142581218-142606006
Accession: 107410
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0068668	zf-C2H2	PF00096.26	2.8e-60	1	10
MGP_C3HHeJ_P0068668	zf-C2H2	PF00096.26	2.8e-60	2	10
MGP_C3HHeJ_P0068668	zf-C2H2	PF00096.26	2.8e-60	3	10
MGP_C3HHeJ_P0068668	zf-C2H2	PF00096.26	2.8e-60	4	10
MGP_C3HHeJ_P0068668	zf-C2H2	PF00096.26	2.8e-60	5	10
MGP_C3HHeJ_P0068668	zf-C2H2	PF00096.26	2.8e-60	6	10
MGP_C3HHeJ_P0068668	zf-C2H2	PF00096.26	2.8e-60	7	10
MGP_C3HHeJ_P0068668	zf-C2H2	PF00096.26	2.8e-60	8	10
MGP_C3HHeJ_P0068668	zf-C2H2	PF00096.26	2.8e-60	9	10
MGP_C3HHeJ_P0068668	zf-C2H2	PF00096.26	2.8e-60	10	10
MGP_C3HHeJ_P0068668	zf-met	PF12874.7	2.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0068671	-	338	-	-	- (aa)	-	-
MGP_C3HHeJ_T0068670	-	2973	-	-	- (aa)	-	-
MGP_C3HHeJ_T0068673	-	771	-	-	- (aa)	-	-
MGP_C3HHeJ_T0068672	-	785	-	-	- (aa)	-	-
MGP_C3HHeJ_T0068674	-	867	-	-	- (aa)	-	-
MGP_C3HHeJ_T0068668	-	2722	XM_006538727	MGP_C3HHeJ_P0068668	794 (aa)	XP_006538790	Q60821
MGP_C3HHeJ_T0068669	-	3478	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C3HHeJ_G0028746's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0028746's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0028746	Zbtb17	60	38.132	MGP_C3HHeJ_G0034447	Zbtb16	61	36.585
MGP_C3HHeJ_G0028746	Zbtb17	56	41.606	MGP_C3HHeJ_G0020445	Rslcan18	66	41.600
MGP_C3HHeJ_G0028746	Zbtb17	58	41.141	MGP_C3HHeJ_G0020446	Zfp759	86	41.141
MGP_C3HHeJ_G0028746	Zbtb17	71	39.891	MGP_C3HHeJ_G0022976	Zfp945	93	39.233
MGP_C3HHeJ_G0028746	Zbtb17	79	46.354	MGP_C3HHeJ_G0026836	Mynn	85	46.354
MGP_C3HHeJ_G0028746	Zbtb17	74	44.444	MGP_C3HHeJ_G0018339	Bcl6b	68	45.312
MGP_C3HHeJ_G0028746	Zbtb17	59	32.021	MGP_C3HHeJ_G0031558	Zfp574	71	38.532
MGP_C3HHeJ_G0028746	Zbtb17	77	34.615	MGP_C3HHeJ_G0022983	Zscan10	78	43.165
MGP_C3HHeJ_G0028746	Zbtb17	62	34.819	MGP_C3HHeJ_G0033668	Zfp319	91	37.805
MGP_C3HHeJ_G0028746	Zbtb17	56	41.518	MGP_C3HHeJ_G0020023	Zkscan4	50	41.518
MGP_C3HHeJ_G0028746	Zbtb17	58	42.857	MGP_C3HHeJ_G0031823	Zfp715	89	43.636
MGP_C3HHeJ_G0028746	Zbtb17	67	47.260	MGP_C3HHeJ_G0031815	-	59	47.260
MGP_C3HHeJ_G0028746	Zbtb17	58	42.857	MGP_C3HHeJ_G0032730	Zfp768	52	42.231
MGP_C3HHeJ_G0028746	Zbtb17	62	50.909	MGP_C3HHeJ_G0029207	Zbtb49	62	67.742
MGP_C3HHeJ_G0028746	Zbtb17	57	38.433	MGP_C3HHeJ_G0031632	Zfp974	88	40.000
MGP_C3HHeJ_G0028746	Zbtb17	69	38.288	MGP_C3HHeJ_G0020463	Zfp748	91	44.109
MGP_C3HHeJ_G0028746	Zbtb17	78	39.568	MGP_C3HHeJ_G0026329	Gzf1	83	37.118
MGP_C3HHeJ_G0028746	Zbtb17	59	36.986	MGP_C3HHeJ_G0018101	Zfp672	90	40.000
MGP_C3HHeJ_G0028746	Zbtb17	61	43.636	MGP_C3HHeJ_G0031521	Zfp112	59	43.636
MGP_C3HHeJ_G0028746	Zbtb17	62	43.182	MGP_C3HHeJ_G0031522	Zfp235	71	44.248
MGP_C3HHeJ_G0028746	Zbtb17	56	44.086	MGP_C3HHeJ_G0031528	Zfp94	76	44.086
MGP_C3HHeJ_G0028746	Zbtb17	64	42.899	MGP_C3HHeJ_G0022953	Zfp677	83	42.899
MGP_C3HHeJ_G0028746	Zbtb17	63	42.606	MGP_C3HHeJ_G0022955	Zfp51	82	42.183
MGP_C3HHeJ_G0028746	Zbtb17	61	42.727	MGP_C3HHeJ_G0024336	Zfp236	69	42.727
MGP_C3HHeJ_G0028746	Zbtb17	55	41.083	MGP_C3HHeJ_G0018152	Zfp867	81	41.083
MGP_C3HHeJ_G0028746	Zbtb17	69	44.706	MGP_C3HHeJ_G0031693	Zfp420	97	44.706
MGP_C3HHeJ_G0028746	Zbtb17	56	40.741	MGP_C3HHeJ_G0031279	Zfp865	78	35.743
MGP_C3HHeJ_G0028746	Zbtb17	54	46.512	MGP_C3HHeJ_G0033828	Zfp1	67	42.083
MGP_C3HHeJ_G0028746	Zbtb17	79	32.955	MGP_C3HHeJ_G0020716	Zfp131	72	32.955
MGP_C3HHeJ_G0028746	Zbtb17	55	43.322	MGP_C3HHeJ_G0018006	Zfp454	65	42.424
MGP_C3HHeJ_G0028746	Zbtb17	63	38.614	MGP_C3HHeJ_G0030394	Repin1	93	38.614
MGP_C3HHeJ_G0028746	Zbtb17	58	40.968	MGP_C3HHeJ_G0033454	Zfp882	85	42.985
MGP_C3HHeJ_G0028746	Zbtb17	56	42.638	MGP_C3HHeJ_G0034162	Zfp872	83	41.964
MGP_C3HHeJ_G0028746	Zbtb17	56	35.083	MGP_C3HHeJ_G0026610	Zfp334	65	39.216
MGP_C3HHeJ_G0028746	Zbtb17	56	44.207	MGP_C3HHeJ_G0031526	Zfp108	66	44.207