EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_C3HHeJ_G0029287 (Gene tree)
Gene ID
-
Gene Symbol
Rbm47
Alias
9530077J19Rik
Full Name
RNA binding motif protein 47
Gene Type
protein_coding
Species
Mus_musculus_c3hhej
Status
putative
Strand
Minus strand
Length
161833 bases
Position
chr5:65614483-65776315
Accession
2384294
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_C3HHeJ_P0071546RRM_1PF00076.223.6e-3713
MGP_C3HHeJ_P0071546RRM_1PF00076.223.6e-3723
MGP_C3HHeJ_P0071546RRM_1PF00076.223.6e-3733
MGP_C3HHeJ_P0071542RRM_1PF00076.225.7e-3713
MGP_C3HHeJ_P0071542RRM_1PF00076.225.7e-3723
MGP_C3HHeJ_P0071542RRM_1PF00076.225.7e-3733
MGP_C3HHeJ_P0071543RRM_1PF00076.225.7e-3713
MGP_C3HHeJ_P0071543RRM_1PF00076.225.7e-3723
MGP_C3HHeJ_P0071543RRM_1PF00076.225.7e-3733
MGP_C3HHeJ_P0071544RRM_1PF00076.225.7e-3713
MGP_C3HHeJ_P0071544RRM_1PF00076.225.7e-3723
MGP_C3HHeJ_P0071544RRM_1PF00076.225.7e-3733
MGP_C3HHeJ_P0071545RRM_1PF00076.225.7e-3713
MGP_C3HHeJ_P0071545RRM_1PF00076.225.7e-3723
MGP_C3HHeJ_P0071545RRM_1PF00076.225.7e-3733
MGP_C3HHeJ_P0071547RRM_1PF00076.225.7e-3713
MGP_C3HHeJ_P0071547RRM_1PF00076.225.7e-3723
MGP_C3HHeJ_P0071547RRM_1PF00076.225.7e-3733
MGP_C3HHeJ_P0071548RRM_1PF00076.225.7e-3713
MGP_C3HHeJ_P0071548RRM_1PF00076.225.7e-3723
MGP_C3HHeJ_P0071548RRM_1PF00076.225.7e-3733
MGP_C3HHeJ_P0071550RRM_1PF00076.222.9e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_C3HHeJ_T0071549-2371--- (aa)--
MGP_C3HHeJ_T0071548-2184-MGP_C3HHeJ_P0071548590 (aa)--
MGP_C3HHeJ_T0071545-4891-MGP_C3HHeJ_P0071545590 (aa)--
MGP_C3HHeJ_T0071544-4639-MGP_C3HHeJ_P0071544590 (aa)--
MGP_C3HHeJ_T0071547-3175-MGP_C3HHeJ_P0071547590 (aa)--
MGP_C3HHeJ_T0071546-2968-MGP_C3HHeJ_P0071546521 (aa)--
MGP_C3HHeJ_T0071543-5207-MGP_C3HHeJ_P0071543590 (aa)--
MGP_C3HHeJ_T0071542-4699XM_006503956MGP_C3HHeJ_P0071542590 (aa)XP_006504019Q91WT8
MGP_C3HHeJ_T0071552-332-MGP_C3HHeJ_P007155213 (aa)--
MGP_C3HHeJ_T0071553-530-MGP_C3HHeJ_P00715536 (aa)--
MGP_C3HHeJ_T0071550-703-MGP_C3HHeJ_P0071550158 (aa)--
MGP_C3HHeJ_T0071551-504--- (aa)--
MGP_C3HHeJ_T0071554-452--- (aa)--
MGP_C3HHeJ_T0071555-464--- (aa)--
Gene Model
Click here to download MGP_C3HHeJ_G0029287's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0029287's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_C3HHeJ_G0029287Rbm478858.451MGP_C3HHeJ_G0034790Syncrip7557.522
MGP_C3HHeJ_G0029287Rbm478859.859MGP_C3HHeJ_G0028662Hnrnpr7348.642
MGP_C3HHeJ_G0029287Rbm479473.649MGP_C3HHeJ_G0027046Rbm466672.468
MGP_C3HHeJ_G0029287Rbm478967.376MGP_C3HHeJ_G0024769A1cf7557.816
MGP_C3HHeJ_G0029287Rbm478150.781MGP_C3HHeJ_G0024023Dnd15841.748

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