EuRBPDB

Description

Ensembl ID: MGP_C3HHeJ_G0029481 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpdl
Alias: AA407431|AA959857|D5Ertd650e|D5Wsu145e|Hnrnpdl1|Hnrpdl|HnrpdlGN|JKTBP|hnRNP DL|hnRNP-DL
Full Name: heterogeneous nuclear ribonucleoprotein D-like
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Minus strand
Length: 6111 bases
Position: chr5:101279046-101285156
Accession: 1355299
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0072446	RRM_1	PF00076.22	2.3e-33	1	2
MGP_C3HHeJ_P0072446	RRM_1	PF00076.22	2.3e-33	2	2
MGP_C3HHeJ_P0072445	RRM_1	PF00076.22	5.3e-33	1	2
MGP_C3HHeJ_P0072445	RRM_1	PF00076.22	5.3e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0072450	-	846	-	-	- (aa)	-	-
MGP_C3HHeJ_T0072445	-	2752	-	MGP_C3HHeJ_P0072445	420 (aa)	-	-
MGP_C3HHeJ_T0072444	-	1842	-	-	- (aa)	-	-
MGP_C3HHeJ_T0072447	-	2149	-	MGP_C3HHeJ_P0072447	420 (aa)	-	-
MGP_C3HHeJ_T0072446	-	2374	-	MGP_C3HHeJ_P0072446	322 (aa)	-	-
MGP_C3HHeJ_T0072449	-	1506	-	MGP_C3HHeJ_P0072449	110 (aa)	-	-
MGP_C3HHeJ_T0072448	-	884	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0029481	Hnrnpdl	78	41.634	MGP_C3HHeJ_G0018679	Msi2	100	54.867
MGP_C3HHeJ_G0029481	Hnrnpdl	58	38.542	MGP_C3HHeJ_G0030429	Hnrnpa2b1	58	38.824
MGP_C3HHeJ_G0029481	Hnrnpdl	51	34.706	MGP_C3HHeJ_G0020376	Hnrnpa0	56	34.706
MGP_C3HHeJ_G0029481	Hnrnpdl	61	30.000	MGP_C3HHeJ_G0028831	Tardbp	82	31.098
MGP_C3HHeJ_G0029481	Hnrnpdl	89	57.292	MGP_C3HHeJ_G0018020	Hnrnpab	82	58.419
MGP_C3HHeJ_G0029481	Hnrnpdl	75	39.676	MGP_C3HHeJ_G0029664	Msi1	58	48.052
MGP_C3HHeJ_G0029481	Hnrnpdl	65	34.118	MGP_C3HHeJ_G0025588	Hnrnpa3	77	30.592
MGP_C3HHeJ_G0029481	Hnrnpdl	54	36.709	MGP_C3HHeJ_G0017249	Cirbp	73	36.709
MGP_C3HHeJ_G0029481	Hnrnpdl	69	36.036	MGP_C3HHeJ_G0017255	Dazap1	99	39.881
MGP_C3HHeJ_G0029481	Hnrnpdl	89	65.278	MGP_C3HHeJ_G0029479	Hnrnpd	100	80.000