EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0029704 (Gene tree)
Gene ID: -
Gene Symbol: Ddx54
Alias: 2410015A15Rik|AI414901|APR-5|DP97
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 54
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Plus strand
Length: 15858 bases
Position: chr5:123229797-123245654
Accession: 1919240
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0073560	DBP10CT	PF08147.12	3.4e-18	1	1
MGP_C3HHeJ_P0073560	ResIII	PF04851.15	2.2e-06	1	1
MGP_C3HHeJ_P0073560	DEAD	PF00270.29	1.3e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0073561	-	4306	-	-	- (aa)	-	-
MGP_C3HHeJ_T0073560	-	4322	-	MGP_C3HHeJ_P0073560	874 (aa)	-	Q8K4L0
MGP_C3HHeJ_T0073563	-	471	-	-	- (aa)	-	-
MGP_C3HHeJ_T0073562	-	845	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C3HHeJ_G0029704's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0029704's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0029704	Ddx54	50	32.143	MGP_C3HHeJ_G0016181	Ddx18	64	32.071