EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0029793 (Gene tree)
Gene ID: -
Gene Symbol: Ddx55
Alias: 2810021H22Rik|Kiaa1595|mKIAA1595
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 55
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Plus strand
Length: 18179 bases
Position: chr5:127608581-127626759
Accession: 1915098
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0074114	ResIII	PF04851.15	7.6e-07	1	1
MGP_C3HHeJ_P0074111	ResIII	PF04851.15	7.9e-07	1	1
MGP_C3HHeJ_P0074114	DEAD	PF00270.29	1e-41	1	1
MGP_C3HHeJ_P0074111	DEAD	PF00270.29	1e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0074115	-	477	-	-	- (aa)	-	-
MGP_C3HHeJ_T0074114	-	2737	-	MGP_C3HHeJ_P0074114	596 (aa)	-	-
MGP_C3HHeJ_T0074117	-	824	-	-	- (aa)	-	-
MGP_C3HHeJ_T0074116	-	1430	-	-	- (aa)	-	-
MGP_C3HHeJ_T0074111	-	2799	-	MGP_C3HHeJ_P0074111	600 (aa)	-	Q6ZPL9
MGP_C3HHeJ_T0074113	-	445	-	-	- (aa)	-	-
MGP_C3HHeJ_T0074112	-	3516	-	MGP_C3HHeJ_P0074112	135 (aa)	-	-

Gene Model

Click here to download MGP_C3HHeJ_G0029793's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0029793's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0029793	Ddx55	60	32.044	MGP_C3HHeJ_G0034749	Ddx43	53	32.044
MGP_C3HHeJ_G0029793	Ddx55	75	31.528	MGP_C3HHeJ_G0025267	Ddx31	74	31.783
MGP_C3HHeJ_G0029793	Ddx55	75	38.631	MGP_C3HHeJ_G0034490	Ddx10	50	38.631
MGP_C3HHeJ_G0029793	Ddx55	59	30.362	MGP_C3HHeJ_G0022409	Eif4a2	93	30.362
MGP_C3HHeJ_G0029793	Ddx55	59	35.635	MGP_C3HHeJ_G0020351	Ddx41	55	35.440
MGP_C3HHeJ_G0029793	Ddx55	64	34.243	MGP_C3HHeJ_G0016682	D1Pas1	56	34.243
MGP_C3HHeJ_G0029793	Ddx55	60	30.886	MGP_C3HHeJ_G0033760	Ddx28	69	30.886
MGP_C3HHeJ_G0029793	Ddx55	60	32.687	MGP_C3HHeJ_G0021815	Ddx17	53	32.687
MGP_C3HHeJ_G0029793	Ddx55	64	33.747	MGP_C3HHeJ_G0035258	Ddx3x	56	33.663
MGP_C3HHeJ_G0029793	Ddx55	63	30.750	MGP_C3HHeJ_G0018617	Ddx52	62	30.750
MGP_C3HHeJ_G0029793	Ddx55	59	31.429	MGP_C3HHeJ_G0016310	Ddx59	54	31.429
MGP_C3HHeJ_G0029793	Ddx55	59	35.977	MGP_C3HHeJ_G0031116	Ddx47	81	35.977
MGP_C3HHeJ_G0029793	Ddx55	58	33.056	MGP_C3HHeJ_G0033388	Ddx49	92	33.238
MGP_C3HHeJ_G0029793	Ddx55	79	35.833	MGP_C3HHeJ_G0016181	Ddx18	68	35.983