EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0030173 (Gene tree)
Gene ID: -
Gene Symbol: Lsm8
Alias: 2010003I05Rik|AW214405|Lsm8|Naa38
Full Name: LSM8 homolog%2C U6 small nuclear RNA associated
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Plus strand
Length: 7173 bases
Position: chr6:15897542-15904714
Accession: 1923772
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0076078	LSM	PF01423.22	4.4e-19	1	1
MGP_C3HHeJ_P0076081	LSM	PF01423.22	2.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0076081	-	503	-	MGP_C3HHeJ_P0076081	100 (aa)	-	-
MGP_C3HHeJ_T0076078	-	807	-	MGP_C3HHeJ_P0076078	96 (aa)	-	Q6ZWM4
MGP_C3HHeJ_T0076079	-	3305	-	-	- (aa)	-	-
MGP_C3HHeJ_T0076080	-	890	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0030173's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0030173	Lsm8	92	34.091	MGP_C3HHeJ_G0033178	Lsm1	65	34.091