EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0030204 (Gene tree)
Gene ID: -
Gene Symbol: Arf5
Alias: -
Full Name: ADP-ribosylation factor 5
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Plus strand
Length: 2950 bases
Position: chr6:25858191-25861140
Accession: 99434
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0076198	MMR_HSR1	PF01926.23	6.1e-05	1	1
MGP_C3HHeJ_P0076199	MMR_HSR1	PF01926.23	6.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0076200	-	917	-	-	- (aa)	-	-
MGP_C3HHeJ_T0076199	-	830	-	MGP_C3HHeJ_P0076199	180 (aa)	-	-
MGP_C3HHeJ_T0076198	-	1124	-	MGP_C3HHeJ_P0076198	180 (aa)	-	P84084

Gene Model

Click here to download MGP_C3HHeJ_G0030204's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0030204's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0030204	Arf5	92	44.242	MGP_C3HHeJ_G0024942	Arl3	91	44.242
MGP_C3HHeJ_G0030204	Arf5	87	60.510	MGP_C3HHeJ_G0017396	Arl1	95	59.302
MGP_C3HHeJ_G0030204	Arf5	100	45.556	MGP_C3HHeJ_G0025466	Arl5a	100	45.556
MGP_C3HHeJ_G0030204	Arf5	92	41.317	MGP_C3HHeJ_G0021181	Arl11	95	41.317
MGP_C3HHeJ_G0030204	Arf5	100	78.889	MGP_C3HHeJ_G0022042	Arf3	99	78.889
MGP_C3HHeJ_G0030204	Arf5	97	42.541	MGP_C3HHeJ_G0019447	Arl4a	91	42.541
MGP_C3HHeJ_G0030204	Arf5	96	31.609	MGP_C3HHeJ_G0030626	Arl8b	94	31.609
MGP_C3HHeJ_G0030204	Arf5	90	45.455	MGP_C3HHeJ_G0027011	Arl14	86	45.455
MGP_C3HHeJ_G0030204	Arf5	94	34.225	MGP_C3HHeJ_G0026736	Arfrp1	90	38.393
MGP_C3HHeJ_G0030204	Arf5	100	80.000	MGP_C3HHeJ_G0019022	Arf2	99	80.000
MGP_C3HHeJ_G0030204	Arf5	96	30.460	MGP_C3HHeJ_G0016286	Arl8a	94	30.460
MGP_C3HHeJ_G0030204	Arf5	98	81.921	MGP_C3HHeJ_G0018146	Arf1	98	81.921
MGP_C3HHeJ_G0030204	Arf5	70	35.938	MGP_C3HHeJ_G0020320	Arl10	62	35.938
MGP_C3HHeJ_G0030204	Arf5	95	46.328	MGP_C3HHeJ_G0016054	Arl4c	92	46.328
MGP_C3HHeJ_G0030204	Arf5	91	36.527	MGP_C3HHeJ_G0022664	Arl6	90	36.527
MGP_C3HHeJ_G0030204	Arf5	100	44.444	MGP_C3HHeJ_G0025099	Arl5b	99	44.444
MGP_C3HHeJ_G0030204	Arf5	92	46.386	MGP_C3HHeJ_G0024485	Arl2	90	46.386
MGP_C3HHeJ_G0030204	Arf5	96	42.197	MGP_C3HHeJ_G0018801	Arl5c	96	42.197
MGP_C3HHeJ_G0030204	Arf5	100	40.323	MGP_C3HHeJ_G0018961	Arl4d	91	40.323