EuRBPDB

Description

Ensembl ID: MGP_C3HHeJ_G0030679 (Gene tree)
Gene ID: -
Gene Symbol: Lsm3
Alias: 1010001J12Rik|2610005D18Rik|6030401D18Rik|SMX4|USS2
Full Name: LSM3 homolog%2C U6 small nuclear RNA and mRNA degradation associated
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Minus strand
Length: 6693 bases
Position: chr6:92380690-92387382
Accession: 1914928
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0078354	LSM	PF01423.22	8.4e-20	1	1
MGP_C3HHeJ_P0078355	LSM	PF01423.22	8.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0078358	-	504	-	-	- (aa)	-	-
MGP_C3HHeJ_T0078357	-	2032	-	-	- (aa)	-	-
MGP_C3HHeJ_T0078356	-	520	-	-	- (aa)	-	-
MGP_C3HHeJ_T0078355	-	618	-	MGP_C3HHeJ_P0078355	102 (aa)	-	-
MGP_C3HHeJ_T0078354	-	743	-	MGP_C3HHeJ_P0078354	102 (aa)	-	P62311

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0030679	Lsm3	74	34.667	MGP_C3HHeJ_G0030473	Lsm5	82	34.667