EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0030726 (Gene tree)
Gene ID: -
Gene Symbol: Rab7
Alias: Rab7a
Full Name: RAB7%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Plus strand
Length: 57115 bases
Position: chr6:95997692-96054806
Accession: 105068
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0078570	MMR_HSR1	PF01926.23	7.6e-07	1	1
MGP_C3HHeJ_P0078571	MMR_HSR1	PF01926.23	7.6e-07	1	1
MGP_C3HHeJ_P0078574	MMR_HSR1	PF01926.23	7.6e-07	1	1
MGP_C3HHeJ_P0078575	MMR_HSR1	PF01926.23	7.6e-07	1	1
MGP_C3HHeJ_P0078576	MMR_HSR1	PF01926.23	7.6e-07	1	1
MGP_C3HHeJ_P0078572	MMR_HSR1	PF01926.23	7.7e-07	1	1
MGP_C3HHeJ_P0078573	MMR_HSR1	PF01926.23	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0078576	-	1282	-	MGP_C3HHeJ_P0078576	207 (aa)	-	-
MGP_C3HHeJ_T0078575	-	1866	-	MGP_C3HHeJ_P0078575	207 (aa)	-	-
MGP_C3HHeJ_T0078574	-	1863	-	MGP_C3HHeJ_P0078574	207 (aa)	-	-
MGP_C3HHeJ_T0078573	-	424	-	MGP_C3HHeJ_P0078573	88 (aa)	-	-
MGP_C3HHeJ_T0078572	-	550	-	MGP_C3HHeJ_P0078572	98 (aa)	-	-
MGP_C3HHeJ_T0078571	-	1664	-	MGP_C3HHeJ_P0078571	207 (aa)	-	-
MGP_C3HHeJ_T0078570	-	1980	-	MGP_C3HHeJ_P0078570	207 (aa)	-	P51150

Gene Model

Click here to download MGP_C3HHeJ_G0030726's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0030726's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0030726	Rab7	90	47.727	MGP_C3HHeJ_G0018918	Rab5c	76	42.941
MGP_C3HHeJ_G0030726	Rab7	95	59.140	MGP_C3HHeJ_G0035937	Rab9	86	54.913
MGP_C3HHeJ_G0030726	Rab7	90	48.864	MGP_C3HHeJ_G0023711	Rab12	57	37.278
MGP_C3HHeJ_G0030726	Rab7	91	46.067	MGP_C3HHeJ_G0021035	Rab2b	80	40.881
MGP_C3HHeJ_G0030726	Rab7	83	35.714	MGP_C3HHeJ_G0018961	Arl4d	58	32.520
MGP_C3HHeJ_G0030726	Rab7	91	47.191	MGP_C3HHeJ_G0032274	Rab6a	94	35.500
MGP_C3HHeJ_G0030726	Rab7	91	46.067	MGP_C3HHeJ_G0029670	Rab35	81	37.500
MGP_C3HHeJ_G0030726	Rab7	91	42.222	MGP_C3HHeJ_G0035367	Rab33a	69	39.881
MGP_C3HHeJ_G0030726	Rab7	92	42.222	MGP_C3HHeJ_G0032214	Rab30	78	40.854
MGP_C3HHeJ_G0030726	Rab7	90	48.864	MGP_C3HHeJ_G0023860	Rab18	79	39.521
MGP_C3HHeJ_G0030726	Rab7	91	47.191	MGP_C3HHeJ_G0034876	Rab6b	94	35.678
MGP_C3HHeJ_G0030726	Rab7	94	49.462	MGP_C3HHeJ_G0019120	Rab37	76	41.071
MGP_C3HHeJ_G0030726	Rab7	98	39.583	MGP_C3HHeJ_G0017819	Rab1a	81	38.235
MGP_C3HHeJ_G0030726	Rab7	91	44.944	MGP_C3HHeJ_G0027739	Rab2a	75	39.024
MGP_C3HHeJ_G0030726	Rab7	97	35.789	MGP_C3HHeJ_G0031289	Rasl2-9	75	33.728
MGP_C3HHeJ_G0030726	Rab7	90	47.727	MGP_C3HHeJ_G0017639	Rab5b	77	42.941
MGP_C3HHeJ_G0030726	Rab7	91	37.778	MGP_C3HHeJ_G0035541	Rab39b	76	34.545
MGP_C3HHeJ_G0030726	Rab7	66	32.117	MGP_C3HHeJ_G0032911	Hras	96	30.808
MGP_C3HHeJ_G0030726	Rab7	94	43.478	MGP_C3HHeJ_G0015674	Rab23	70	33.918
MGP_C3HHeJ_G0030726	Rab7	91	40.449	MGP_C3HHeJ_G0021976	Rabl2	71	33.735
MGP_C3HHeJ_G0030726	Rab7	75	33.333	MGP_C3HHeJ_G0031183	Kras	87	33.929
MGP_C3HHeJ_G0030726	Rab7	73	33.113	MGP_C3HHeJ_G0027390	Nras	95	33.108
MGP_C3HHeJ_G0030726	Rab7	97	45.263	MGP_C3HHeJ_G0023612	Rab5a	80	41.243
MGP_C3HHeJ_G0030726	Rab7	92	46.667	MGP_C3HHeJ_G0026677	Rab22a	82	40.854
MGP_C3HHeJ_G0030726	Rab7	93	42.857	MGP_C3HHeJ_G0034626	Rab11a	87	38.686
MGP_C3HHeJ_G0030726	Rab7	79	31.169	MGP_C3HHeJ_G0034853	Mras	76	33.742
MGP_C3HHeJ_G0030726	Rab7	92	43.333	MGP_C3HHeJ_G0017111	Rab36	63	36.571
MGP_C3HHeJ_G0030726	Rab7	91	43.820	MGP_C3HHeJ_G0025384	Rab14	86	40.299
MGP_C3HHeJ_G0030726	Rab7	99	40.206	MGP_C3HHeJ_G0019609	Rab15	81	33.520
MGP_C3HHeJ_G0030726	Rab7	100	37.374	MGP_C3HHeJ_G0026913	Rab33b	72	37.870
MGP_C3HHeJ_G0030726	Rab7	94	35.870	MGP_C3HHeJ_G0019311	Dnajc27	60	36.145
MGP_C3HHeJ_G0030726	Rab7	98	38.542	MGP_C3HHeJ_G0024427	Rab1b	100	34.146
MGP_C3HHeJ_G0030726	Rab7	92	47.778	MGP_C3HHeJ_G0023702	Rab31	82	44.512
MGP_C3HHeJ_G0030726	Rab7	98	60.417	MGP_C3HHeJ_G0035785	Rab9b	99	52.217
MGP_C3HHeJ_G0030726	Rab7	91	44.944	MGP_C3HHeJ_G0027115	Rab25	75	39.157
MGP_C3HHeJ_G0030726	Rab7	93	42.857	MGP_C3HHeJ_G0023261	Rab11b	72	40.491