EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0030840 (Gene tree)
Gene ID: -
Gene Symbol: Gm5580
Alias: -
Full Name: predicted pseudogene 5580
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Minus strand
Length: 887 bases
Position: chr6:106083410-106084296
Accession: 3646594
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0079139	DEAD	PF00270.29	6.5e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0079139	-	887	-	MGP_C3HHeJ_P0079139	268 (aa)	-	A0A0N4SVP8

Gene Model

Click here to download MGP_C3HHeJ_G0030840's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0030840's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0030840	Gm5580	82	38.667	MGP_C3HHeJ_G0023360	Ddx39b	60	39.487
MGP_C3HHeJ_G0030840	Gm5580	82	38.667	MGP_C3HHeJ_G0033525	Ddx39	76	41.509
MGP_C3HHeJ_G0030840	Gm5580	89	65.272	MGP_C3HHeJ_G0022409	Eif4a2	65	65.272
MGP_C3HHeJ_G0030840	Gm5580	100	100.000	MGP_C3HHeJ_G0030839	Gm8994	100	100.000
MGP_C3HHeJ_G0030840	Gm5580	81	34.234	MGP_C3HHeJ_G0033817	Ddx19b	51	34.234
MGP_C3HHeJ_G0030840	Gm5580	83	30.705	MGP_C3HHeJ_G0017772	Ddx56	91	30.435
MGP_C3HHeJ_G0030840	Gm5580	93	30.677	MGP_C3HHeJ_G0031116	Ddx47	66	35.593
MGP_C3HHeJ_G0030840	Gm5580	81	32.806	MGP_C3HHeJ_G0033816	Ddx19a	50	32.806
MGP_C3HHeJ_G0030840	Gm5580	82	30.493	MGP_C3HHeJ_G0033388	Ddx49	63	30.493
MGP_C3HHeJ_G0030840	Gm5580	98	95.817	MGP_C3HHeJ_G0019227	Eif4a3	81	87.833