EuRBPDB

Description

Ensembl ID: MGP_C3HHeJ_G0030905 (Gene tree)
Gene ID: -
Gene Symbol: Smarcad1
Alias: AV081750|AW226546|D6Pas1|Etl1|Kiaa1122|mKIAA1122
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Minus strand
Length: 72049 bases
Position: chr6:120055976-120128024
Accession: 95453
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0079427	ResIII	PF04851.15	1.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0079441	-	466	-	-	- (aa)	-	-
MGP_C3HHeJ_T0079440	-	600	-	MGP_C3HHeJ_P0079440	73 (aa)	-	-
MGP_C3HHeJ_T0079427	-	5166	XM_006505509	MGP_C3HHeJ_P0079427	1021 (aa)	XP_006505572	Q04692
MGP_C3HHeJ_T0079428	-	4177	-	MGP_C3HHeJ_P0079428	123 (aa)	-	-
MGP_C3HHeJ_T0079429	-	2525	-	-	- (aa)	-	-
MGP_C3HHeJ_T0079439	-	734	-	MGP_C3HHeJ_P0079439	73 (aa)	-	-
MGP_C3HHeJ_T0079438	-	472	-	MGP_C3HHeJ_P0079438	68 (aa)	-	-
MGP_C3HHeJ_T0079435	-	643	-	-	- (aa)	-	-
MGP_C3HHeJ_T0079434	-	635	-	-	- (aa)	-	-
MGP_C3HHeJ_T0079437	-	739	-	MGP_C3HHeJ_P0079437	73 (aa)	-	-
MGP_C3HHeJ_T0079436	-	602	-	MGP_C3HHeJ_P0079436	134 (aa)	-	-
MGP_C3HHeJ_T0079431	-	726	-	MGP_C3HHeJ_P0079431	45 (aa)	-	-
MGP_C3HHeJ_T0079430	-	643	-	-	- (aa)	-	-
MGP_C3HHeJ_T0079433	-	3062	-	-	- (aa)	-	-
MGP_C3HHeJ_T0079432	-	2821	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0030905	Smarcad1	50	30.112	MGP_C3HHeJ_G0028314	Rad54l	66	30.112
MGP_C3HHeJ_G0030905	Smarcad1	50	35.135	MGP_C3HHeJ_G0027345	Chd1l	51	35.135
MGP_C3HHeJ_G0030905	Smarcad1	51	37.705	MGP_C3HHeJ_G0024829	Hells	66	37.887