EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0031116 (Gene tree)
Gene ID: -
Gene Symbol: Ddx47
Alias: 4930588A18Rik|C77285
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Plus strand
Length: 11985 bases
Position: chr6:137951199-137963183
Accession: 1915005
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0080244	ResIII	PF04851.15	1.1e-05	1	1
MGP_C3HHeJ_P0080236	ResIII	PF04851.15	1.5e-05	1	1
MGP_C3HHeJ_P0080244	DEAD	PF00270.29	1.7e-48	1	1
MGP_C3HHeJ_P0080236	DEAD	PF00270.29	2.8e-48	1	1
MGP_C3HHeJ_P0080243	DEAD	PF00270.29	4.3e-38	1	2
MGP_C3HHeJ_P0080243	DEAD	PF00270.29	4.3e-38	2	2
MGP_C3HHeJ_P0080238	DEAD	PF00270.29	1.1e-21	1	1
MGP_C3HHeJ_P0080241	DEAD	PF00270.29	3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0080246	-	791	-	-	- (aa)	-	-
MGP_C3HHeJ_T0080247	-	3272	-	MGP_C3HHeJ_P0080247	61 (aa)	-	-
MGP_C3HHeJ_T0080244	-	1078	-	MGP_C3HHeJ_P0080244	359 (aa)	-	-
MGP_C3HHeJ_T0080245	-	693	-	-	- (aa)	-	-
MGP_C3HHeJ_T0080242	-	620	-	-	- (aa)	-	-
MGP_C3HHeJ_T0080243	-	1139	-	MGP_C3HHeJ_P0080243	379 (aa)	-	-
MGP_C3HHeJ_T0080240	-	4017	-	-	- (aa)	-	-
MGP_C3HHeJ_T0080241	-	551	-	MGP_C3HHeJ_P0080241	180 (aa)	-	-
MGP_C3HHeJ_T0080239	-	978	-	-	- (aa)	-	-
MGP_C3HHeJ_T0080238	-	607	-	MGP_C3HHeJ_P0080238	196 (aa)	-	-
MGP_C3HHeJ_T0080237	-	435	-	MGP_C3HHeJ_P0080237	138 (aa)	-	-
MGP_C3HHeJ_T0080236	-	1764	-	MGP_C3HHeJ_P0080236	455 (aa)	-	Q9CWX9

Gene Model

Click here to download MGP_C3HHeJ_G0031116's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0031116's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0031116	Ddx47	93	33.760	MGP_C3HHeJ_G0020677	Ddx4	56	34.271
MGP_C3HHeJ_G0031116	Ddx47	85	33.333	MGP_C3HHeJ_G0020351	Ddx41	58	35.556
MGP_C3HHeJ_G0031116	Ddx47	91	31.806	MGP_C3HHeJ_G0016310	Ddx59	60	33.602
MGP_C3HHeJ_G0031116	Ddx47	88	37.432	MGP_C3HHeJ_G0016181	Ddx18	55	38.251
MGP_C3HHeJ_G0031116	Ddx47	83	32.011	MGP_C3HHeJ_G0018617	Ddx52	58	33.428
MGP_C3HHeJ_G0031116	Ddx47	86	38.889	MGP_C3HHeJ_G0017772	Ddx56	99	35.887
MGP_C3HHeJ_G0031116	Ddx47	84	35.652	MGP_C3HHeJ_G0025267	Ddx31	61	31.765
MGP_C3HHeJ_G0031116	Ddx47	94	30.469	MGP_C3HHeJ_G0022409	Eif4a2	94	32.637
MGP_C3HHeJ_G0031116	Ddx47	85	36.869	MGP_C3HHeJ_G0021815	Ddx17	57	37.374
MGP_C3HHeJ_G0031116	Ddx47	81	35.977	MGP_C3HHeJ_G0029793	Ddx55	59	35.977
MGP_C3HHeJ_G0031116	Ddx47	96	30.749	MGP_C3HHeJ_G0019227	Eif4a3	94	32.041
MGP_C3HHeJ_G0031116	Ddx47	66	35.593	MGP_C3HHeJ_G0030840	Gm5580	93	30.677
MGP_C3HHeJ_G0031116	Ddx47	90	32.095	MGP_C3HHeJ_G0033525	Ddx39	89	32.620
MGP_C3HHeJ_G0031116	Ddx47	79	37.651	MGP_C3HHeJ_G0019064	Ddx5	71	37.457
MGP_C3HHeJ_G0031116	Ddx47	66	35.593	MGP_C3HHeJ_G0030839	Gm8994	93	30.677
MGP_C3HHeJ_G0031116	Ddx47	90	31.926	MGP_C3HHeJ_G0023360	Ddx39b	88	34.037
MGP_C3HHeJ_G0031116	Ddx47	86	46.875	MGP_C3HHeJ_G0019353	Ddx1	60	46.875
MGP_C3HHeJ_G0031116	Ddx47	94	30.175	MGP_C3HHeJ_G0017064	Ddx50	54	31.204
MGP_C3HHeJ_G0031116	Ddx47	86	33.690	MGP_C3HHeJ_G0035258	Ddx3x	56	34.492
MGP_C3HHeJ_G0031116	Ddx47	70	49.398	MGP_C3HHeJ_G0033760	Ddx28	72	33.079
MGP_C3HHeJ_G0031116	Ddx47	86	33.690	MGP_C3HHeJ_G0016682	D1Pas1	57	34.759
MGP_C3HHeJ_G0031116	Ddx47	95	45.824	MGP_C3HHeJ_G0033388	Ddx49	97	49.271
MGP_C3HHeJ_G0031116	Ddx47	91	34.218	MGP_C3HHeJ_G0034749	Ddx43	59	35.678