EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0031526 (Gene tree)
Gene ID: -
Gene Symbol: Zfp108
Alias: -
Full Name: zinc finger protein 108
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Plus strand
Length: 7582 bases
Position: chr7:22949478-22957059
Accession: 1891198
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0081761	zf-C2H2	PF00096.26	2.6e-65	1	12
MGP_C3HHeJ_P0081761	zf-C2H2	PF00096.26	2.6e-65	2	12
MGP_C3HHeJ_P0081761	zf-C2H2	PF00096.26	2.6e-65	3	12
MGP_C3HHeJ_P0081761	zf-C2H2	PF00096.26	2.6e-65	4	12
MGP_C3HHeJ_P0081761	zf-C2H2	PF00096.26	2.6e-65	5	12
MGP_C3HHeJ_P0081761	zf-C2H2	PF00096.26	2.6e-65	6	12
MGP_C3HHeJ_P0081761	zf-C2H2	PF00096.26	2.6e-65	7	12
MGP_C3HHeJ_P0081761	zf-C2H2	PF00096.26	2.6e-65	8	12
MGP_C3HHeJ_P0081761	zf-C2H2	PF00096.26	2.6e-65	9	12
MGP_C3HHeJ_P0081761	zf-C2H2	PF00096.26	2.6e-65	10	12
MGP_C3HHeJ_P0081761	zf-C2H2	PF00096.26	2.6e-65	11	12
MGP_C3HHeJ_P0081761	zf-C2H2	PF00096.26	2.6e-65	12	12
MGP_C3HHeJ_P0081759	zf-C2H2	PF00096.26	2.6e-65	1	12
MGP_C3HHeJ_P0081759	zf-C2H2	PF00096.26	2.6e-65	2	12
MGP_C3HHeJ_P0081759	zf-C2H2	PF00096.26	2.6e-65	3	12
MGP_C3HHeJ_P0081759	zf-C2H2	PF00096.26	2.6e-65	4	12
MGP_C3HHeJ_P0081759	zf-C2H2	PF00096.26	2.6e-65	5	12
MGP_C3HHeJ_P0081759	zf-C2H2	PF00096.26	2.6e-65	6	12
MGP_C3HHeJ_P0081759	zf-C2H2	PF00096.26	2.6e-65	7	12
MGP_C3HHeJ_P0081759	zf-C2H2	PF00096.26	2.6e-65	8	12
MGP_C3HHeJ_P0081759	zf-C2H2	PF00096.26	2.6e-65	9	12
MGP_C3HHeJ_P0081759	zf-C2H2	PF00096.26	2.6e-65	10	12
MGP_C3HHeJ_P0081759	zf-C2H2	PF00096.26	2.6e-65	11	12
MGP_C3HHeJ_P0081759	zf-C2H2	PF00096.26	2.6e-65	12	12
MGP_C3HHeJ_P0081760	zf-C2H2	PF00096.26	2.6e-65	1	12
MGP_C3HHeJ_P0081760	zf-C2H2	PF00096.26	2.6e-65	2	12
MGP_C3HHeJ_P0081760	zf-C2H2	PF00096.26	2.6e-65	3	12
MGP_C3HHeJ_P0081760	zf-C2H2	PF00096.26	2.6e-65	4	12
MGP_C3HHeJ_P0081760	zf-C2H2	PF00096.26	2.6e-65	5	12
MGP_C3HHeJ_P0081760	zf-C2H2	PF00096.26	2.6e-65	6	12
MGP_C3HHeJ_P0081760	zf-C2H2	PF00096.26	2.6e-65	7	12
MGP_C3HHeJ_P0081760	zf-C2H2	PF00096.26	2.6e-65	8	12
MGP_C3HHeJ_P0081760	zf-C2H2	PF00096.26	2.6e-65	9	12
MGP_C3HHeJ_P0081760	zf-C2H2	PF00096.26	2.6e-65	10	12
MGP_C3HHeJ_P0081760	zf-C2H2	PF00096.26	2.6e-65	11	12
MGP_C3HHeJ_P0081760	zf-C2H2	PF00096.26	2.6e-65	12	12
MGP_C3HHeJ_P0081761	zf-met	PF12874.7	7.5e-09	1	1
MGP_C3HHeJ_P0081759	zf-met	PF12874.7	7.5e-09	1	1
MGP_C3HHeJ_P0081760	zf-met	PF12874.7	7.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0081759	-	2524	XM_017322371	MGP_C3HHeJ_P0081759	640 (aa)	XP_017177860	E9Q8I5
MGP_C3HHeJ_T0081761	-	1923	-	MGP_C3HHeJ_P0081761	640 (aa)	-	-
MGP_C3HHeJ_T0081760	-	2569	-	MGP_C3HHeJ_P0081760	640 (aa)	-	-

Gene Model

Click here to download MGP_C3HHeJ_G0031526's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0031526's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0031526	Zfp108	99	42.472	MGP_C3HHeJ_G0022976	Zfp945	98	65.116
MGP_C3HHeJ_G0031526	Zfp108	99	51.757	MGP_C3HHeJ_G0020463	Zfp748	97	54.545
MGP_C3HHeJ_G0031526	Zfp108	79	55.556	MGP_C3HHeJ_G0031693	Zfp420	99	55.556
MGP_C3HHeJ_G0031526	Zfp108	66	38.411	MGP_C3HHeJ_G0030900	Prdm5	68	46.154
MGP_C3HHeJ_G0031526	Zfp108	70	34.565	MGP_C3HHeJ_G0026648	Zfp64	73	35.093
MGP_C3HHeJ_G0031526	Zfp108	99	75.668	MGP_C3HHeJ_G0031522	Zfp235	100	63.947
MGP_C3HHeJ_G0031526	Zfp108	99	50.201	MGP_C3HHeJ_G0031527	Zfp61	99	50.201
MGP_C3HHeJ_G0031526	Zfp108	99	58.333	MGP_C3HHeJ_G0031528	Zfp94	97	58.333
MGP_C3HHeJ_G0031526	Zfp108	99	50.862	MGP_C3HHeJ_G0033828	Zfp1	100	49.035
MGP_C3HHeJ_G0031526	Zfp108	99	49.631	MGP_C3HHeJ_G0021752	Zfp251	95	50.137
MGP_C3HHeJ_G0031526	Zfp108	99	50.836	MGP_C3HHeJ_G0018006	Zfp454	98	50.836
MGP_C3HHeJ_G0031526	Zfp108	74	35.854	MGP_C3HHeJ_G0030394	Repin1	94	36.098
MGP_C3HHeJ_G0031526	Zfp108	58	45.000	MGP_C3HHeJ_G0024336	Zfp236	65	44.643
MGP_C3HHeJ_G0031526	Zfp108	68	49.333	MGP_C3HHeJ_G0034162	Zfp872	86	49.333
MGP_C3HHeJ_G0031526	Zfp108	99	47.230	MGP_C3HHeJ_G0022953	Zfp677	98	47.230
MGP_C3HHeJ_G0031526	Zfp108	78	54.348	MGP_C3HHeJ_G0031823	Zfp715	66	59.524
MGP_C3HHeJ_G0031526	Zfp108	66	52.000	MGP_C3HHeJ_G0020023	Zkscan4	53	52.000
MGP_C3HHeJ_G0031526	Zfp108	58	42.194	MGP_C3HHeJ_G0022983	Zscan10	78	39.617
MGP_C3HHeJ_G0031526	Zfp108	99	41.972	MGP_C3HHeJ_G0033454	Zfp882	99	41.972
MGP_C3HHeJ_G0031526	Zfp108	99	46.750	MGP_C3HHeJ_G0020446	Zfp759	88	48.667
MGP_C3HHeJ_G0031526	Zfp108	99	53.782	MGP_C3HHeJ_G0020445	Rslcan18	79	55.814
MGP_C3HHeJ_G0031526	Zfp108	73	36.318	MGP_C3HHeJ_G0031558	Zfp574	73	42.105
MGP_C3HHeJ_G0031526	Zfp108	68	46.352	MGP_C3HHeJ_G0018101	Zfp672	99	41.250
MGP_C3HHeJ_G0031526	Zfp108	67	53.448	MGP_C3HHeJ_G0030551	Zfp637	78	50.521
MGP_C3HHeJ_G0031526	Zfp108	79	57.955	MGP_C3HHeJ_G0031305	Zfp28	56	57.386
MGP_C3HHeJ_G0031526	Zfp108	77	43.928	MGP_C3HHeJ_G0031632	Zfp974	94	46.361
MGP_C3HHeJ_G0031526	Zfp108	99	47.606	MGP_C3HHeJ_G0022955	Zfp51	94	47.754
MGP_C3HHeJ_G0031526	Zfp108	99	63.372	MGP_C3HHeJ_G0031521	Zfp112	99	63.372
MGP_C3HHeJ_G0031526	Zfp108	99	47.876	MGP_C3HHeJ_G0026182	Zfp661	97	47.876
MGP_C3HHeJ_G0031526	Zfp108	70	45.299	MGP_C3HHeJ_G0032732	E430018J23Rik	62	45.299
MGP_C3HHeJ_G0031526	Zfp108	70	45.455	MGP_C3HHeJ_G0032733	-	89	45.455
MGP_C3HHeJ_G0031526	Zfp108	69	53.957	MGP_C3HHeJ_G0032730	Zfp768	51	53.521
MGP_C3HHeJ_G0031526	Zfp108	66	48.077	MGP_C3HHeJ_G0029207	Zbtb49	59	49.296
MGP_C3HHeJ_G0031526	Zfp108	72	41.329	MGP_C3HHeJ_G0033668	Zfp319	91	37.164
MGP_C3HHeJ_G0031526	Zfp108	66	44.207	MGP_C3HHeJ_G0028746	Zbtb17	56	44.207
MGP_C3HHeJ_G0031526	Zfp108	65	45.000	MGP_C3HHeJ_G0029542	Gfi1	100	50.427
MGP_C3HHeJ_G0031526	Zfp108	99	45.898	MGP_C3HHeJ_G0031815	-	98	52.830
MGP_C3HHeJ_G0031526	Zfp108	71	47.727	MGP_C3HHeJ_G0018152	Zfp867	96	53.659
MGP_C3HHeJ_G0031526	Zfp108	66	40.435	MGP_C3HHeJ_G0031279	Zfp865	78	33.032
MGP_C3HHeJ_G0031526	Zfp108	99	38.911	MGP_C3HHeJ_G0026610	Zfp334	84	52.083