EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0031607 (Gene tree)
Gene ID: -
Gene Symbol: Snrpa
Alias: C430021M15Rik|Rnu1a-1|Rnu1a1|U1 snRNP|U1-A|U1A
Full Name: small nuclear ribonucleoprotein polypeptide A
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Minus strand
Length: 10399 bases
Position: chr7:26247309-26257707
Accession: 1855690
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0082076	RRM_5	PF13893.6	4.7e-07	1	2
MGP_C3HHeJ_P0082076	RRM_5	PF13893.6	4.7e-07	2	2
MGP_C3HHeJ_P0082077	RRM_5	PF13893.6	4.7e-07	1	2
MGP_C3HHeJ_P0082077	RRM_5	PF13893.6	4.7e-07	2	2
MGP_C3HHeJ_P0082078	RRM_5	PF13893.6	4.7e-07	1	2
MGP_C3HHeJ_P0082078	RRM_5	PF13893.6	4.7e-07	2	2
MGP_C3HHeJ_P0082076	RRM_1	PF00076.22	4.5e-28	1	2
MGP_C3HHeJ_P0082076	RRM_1	PF00076.22	4.5e-28	2	2
MGP_C3HHeJ_P0082077	RRM_1	PF00076.22	4.5e-28	1	2
MGP_C3HHeJ_P0082077	RRM_1	PF00076.22	4.5e-28	2	2
MGP_C3HHeJ_P0082078	RRM_1	PF00076.22	4.5e-28	1	2
MGP_C3HHeJ_P0082078	RRM_1	PF00076.22	4.5e-28	2	2
MGP_C3HHeJ_P0082079	RRM_1	PF00076.22	1.1e-18	1	2
MGP_C3HHeJ_P0082079	RRM_1	PF00076.22	1.1e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0082080	-	510	-	MGP_C3HHeJ_P0082080	44 (aa)	-	-
MGP_C3HHeJ_T0082081	-	1690	-	-	- (aa)	-	-
MGP_C3HHeJ_T0082079	-	968	-	MGP_C3HHeJ_P0082079	247 (aa)	-	-
MGP_C3HHeJ_T0082078	-	1362	-	MGP_C3HHeJ_P0082078	287 (aa)	-	-
MGP_C3HHeJ_T0082077	-	1333	-	MGP_C3HHeJ_P0082077	287 (aa)	-	-
MGP_C3HHeJ_T0082076	-	1285	-	MGP_C3HHeJ_P0082076	287 (aa)	-	-
MGP_C3HHeJ_T0082075	-	502	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C3HHeJ_G0031607's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0031607's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0031607	Snrpa	99	90.141	MGP_C3HHeJ_G0022938	Gm5145	100	90.141
MGP_C3HHeJ_G0031607	Snrpa	97	55.235	MGP_C3HHeJ_G0026293	Snrpb2	99	63.121