EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0031666 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpl
Alias: C79783|D830027H13Rik|Hnrpl
Full Name: heterogeneous nuclear ribonucleoprotein L
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Plus strand
Length: 14753 bases
Position: chr7:28026238-28040990
Accession: 104816
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0082305	RRM_5	PF13893.6	2.4e-60	1	2
MGP_C3HHeJ_P0082305	RRM_5	PF13893.6	2.4e-60	2	2
MGP_C3HHeJ_P0082309	RRM_5	PF13893.6	2.4e-60	1	2
MGP_C3HHeJ_P0082309	RRM_5	PF13893.6	2.4e-60	2	2
MGP_C3HHeJ_P0082310	RRM_5	PF13893.6	2.9e-60	1	2
MGP_C3HHeJ_P0082310	RRM_5	PF13893.6	2.9e-60	2	2
MGP_C3HHeJ_P0082307	RRM_5	PF13893.6	1.9e-59	1	2
MGP_C3HHeJ_P0082307	RRM_5	PF13893.6	1.9e-59	2	2
MGP_C3HHeJ_P0082305	RRM_1	PF00076.22	3.3e-22	1	2
MGP_C3HHeJ_P0082305	RRM_1	PF00076.22	3.3e-22	2	2
MGP_C3HHeJ_P0082309	RRM_1	PF00076.22	3.3e-22	1	2
MGP_C3HHeJ_P0082309	RRM_1	PF00076.22	3.3e-22	2	2
MGP_C3HHeJ_P0082310	RRM_1	PF00076.22	4.2e-22	1	2
MGP_C3HHeJ_P0082310	RRM_1	PF00076.22	4.2e-22	2	2
MGP_C3HHeJ_P0082307	RRM_1	PF00076.22	1.6e-16	1	1
MGP_C3HHeJ_P0082308	RRM_1	PF00076.22	1.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0082307	-	1896	-	MGP_C3HHeJ_P0082307	456 (aa)	-	-
MGP_C3HHeJ_T0082311	-	2424	-	-	- (aa)	-	-
MGP_C3HHeJ_T0082316	-	768	-	-	- (aa)	-	-
MGP_C3HHeJ_T0082317	-	670	-	-	- (aa)	-	-
MGP_C3HHeJ_T0082314	-	638	-	-	- (aa)	-	-
MGP_C3HHeJ_T0082315	-	1087	-	-	- (aa)	-	-
MGP_C3HHeJ_T0082305	-	2677	XM_006539556	MGP_C3HHeJ_P0082305	586 (aa)	XP_006539619	Q8R081
MGP_C3HHeJ_T0082313	-	504	-	-	- (aa)	-	-
MGP_C3HHeJ_T0082310	-	2178	-	MGP_C3HHeJ_P0082310	614 (aa)	-	-
MGP_C3HHeJ_T0082306	-	2273	-	-	- (aa)	-	-
MGP_C3HHeJ_T0082309	-	2140	-	MGP_C3HHeJ_P0082309	586 (aa)	-	-
MGP_C3HHeJ_T0082308	-	502	-	MGP_C3HHeJ_P0082308	112 (aa)	-	-
MGP_C3HHeJ_T0082312	-	1848	-	MGP_C3HHeJ_P0082312	201 (aa)	-	-

Gene Model

Click here to download MGP_C3HHeJ_G0031666's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0031666's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0031666	Hnrnpl	100	63.393	MGP_C3HHeJ_G0023778	Hnrnpll	80	58.065
MGP_C3HHeJ_G0031666	Hnrnpl	55	36.207	MGP_C3HHeJ_G0028037	Ptbp3	83	35.537
MGP_C3HHeJ_G0031666	Hnrnpl	95	30.045	MGP_C3HHeJ_G0017226	Ptbp1	80	30.583
MGP_C3HHeJ_G0031666	Hnrnpl	77	30.645	MGP_C3HHeJ_G0027527	Ptbp2	77	30.645