EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0031693 (Gene tree)
Gene ID: -
Gene Symbol: Zfp420
Alias: B230119D13|B230312I18Rik|mszf59-1|mszf70
Full Name: zinc finger protein 420
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Plus strand
Length: 18314 bases
Position: chr7:29211696-29230009
Accession: 2444666
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0082430	zf-C2H2	PF00096.26	2.6e-113	1	18
MGP_C3HHeJ_P0082430	zf-C2H2	PF00096.26	2.6e-113	2	18
MGP_C3HHeJ_P0082430	zf-C2H2	PF00096.26	2.6e-113	3	18
MGP_C3HHeJ_P0082430	zf-C2H2	PF00096.26	2.6e-113	4	18
MGP_C3HHeJ_P0082430	zf-C2H2	PF00096.26	2.6e-113	5	18
MGP_C3HHeJ_P0082430	zf-C2H2	PF00096.26	2.6e-113	6	18
MGP_C3HHeJ_P0082430	zf-C2H2	PF00096.26	2.6e-113	7	18
MGP_C3HHeJ_P0082430	zf-C2H2	PF00096.26	2.6e-113	8	18
MGP_C3HHeJ_P0082430	zf-C2H2	PF00096.26	2.6e-113	9	18
MGP_C3HHeJ_P0082430	zf-C2H2	PF00096.26	2.6e-113	10	18
MGP_C3HHeJ_P0082430	zf-C2H2	PF00096.26	2.6e-113	11	18
MGP_C3HHeJ_P0082430	zf-C2H2	PF00096.26	2.6e-113	12	18
MGP_C3HHeJ_P0082430	zf-C2H2	PF00096.26	2.6e-113	13	18
MGP_C3HHeJ_P0082430	zf-C2H2	PF00096.26	2.6e-113	14	18
MGP_C3HHeJ_P0082430	zf-C2H2	PF00096.26	2.6e-113	15	18
MGP_C3HHeJ_P0082430	zf-C2H2	PF00096.26	2.6e-113	16	18
MGP_C3HHeJ_P0082430	zf-C2H2	PF00096.26	2.6e-113	17	18
MGP_C3HHeJ_P0082430	zf-C2H2	PF00096.26	2.6e-113	18	18
MGP_C3HHeJ_P0082433	zf-C2H2	PF00096.26	2.6e-113	1	18
MGP_C3HHeJ_P0082433	zf-C2H2	PF00096.26	2.6e-113	2	18
MGP_C3HHeJ_P0082433	zf-C2H2	PF00096.26	2.6e-113	3	18
MGP_C3HHeJ_P0082433	zf-C2H2	PF00096.26	2.6e-113	4	18
MGP_C3HHeJ_P0082433	zf-C2H2	PF00096.26	2.6e-113	5	18
MGP_C3HHeJ_P0082433	zf-C2H2	PF00096.26	2.6e-113	6	18
MGP_C3HHeJ_P0082433	zf-C2H2	PF00096.26	2.6e-113	7	18
MGP_C3HHeJ_P0082433	zf-C2H2	PF00096.26	2.6e-113	8	18
MGP_C3HHeJ_P0082433	zf-C2H2	PF00096.26	2.6e-113	9	18
MGP_C3HHeJ_P0082433	zf-C2H2	PF00096.26	2.6e-113	10	18
MGP_C3HHeJ_P0082433	zf-C2H2	PF00096.26	2.6e-113	11	18
MGP_C3HHeJ_P0082433	zf-C2H2	PF00096.26	2.6e-113	12	18
MGP_C3HHeJ_P0082433	zf-C2H2	PF00096.26	2.6e-113	13	18
MGP_C3HHeJ_P0082433	zf-C2H2	PF00096.26	2.6e-113	14	18
MGP_C3HHeJ_P0082433	zf-C2H2	PF00096.26	2.6e-113	15	18
MGP_C3HHeJ_P0082433	zf-C2H2	PF00096.26	2.6e-113	16	18
MGP_C3HHeJ_P0082433	zf-C2H2	PF00096.26	2.6e-113	17	18
MGP_C3HHeJ_P0082433	zf-C2H2	PF00096.26	2.6e-113	18	18
MGP_C3HHeJ_P0082430	zf-met	PF12874.7	8.3e-08	1	1
MGP_C3HHeJ_P0082433	zf-met	PF12874.7	8.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0082434	-	768	-	-	- (aa)	-	-
MGP_C3HHeJ_T0082433	-	2744	-	MGP_C3HHeJ_P0082433	578 (aa)	-	-
MGP_C3HHeJ_T0082432	-	2982	-	-	- (aa)	-	-
MGP_C3HHeJ_T0082431	-	689	-	-	- (aa)	-	-
MGP_C3HHeJ_T0082430	-	2537	XM_006539873	MGP_C3HHeJ_P0082430	578 (aa)	XP_006539936	Q7TMN8

Gene Model

Click here to download MGP_C3HHeJ_G0031693's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0031693's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0031693	Zfp420	97	56.897	MGP_C3HHeJ_G0030551	Zfp637	75	54.167
MGP_C3HHeJ_G0031693	Zfp420	95	41.722	MGP_C3HHeJ_G0030900	Prdm5	91	48.387
MGP_C3HHeJ_G0031693	Zfp420	98	39.286	MGP_C3HHeJ_G0026648	Zfp64	69	36.504
MGP_C3HHeJ_G0031693	Zfp420	99	36.677	MGP_C3HHeJ_G0031558	Zfp574	93	37.533
MGP_C3HHeJ_G0031693	Zfp420	98	37.309	MGP_C3HHeJ_G0033668	Zfp319	93	36.919
MGP_C3HHeJ_G0031693	Zfp420	99	50.909	MGP_C3HHeJ_G0020023	Zkscan4	54	61.184
MGP_C3HHeJ_G0031693	Zfp420	99	49.905	MGP_C3HHeJ_G0022976	Zfp945	97	50.469
MGP_C3HHeJ_G0031693	Zfp420	99	51.052	MGP_C3HHeJ_G0031823	Zfp715	71	51.316
MGP_C3HHeJ_G0031693	Zfp420	95	59.426	MGP_C3HHeJ_G0026182	Zfp661	72	59.426
MGP_C3HHeJ_G0031693	Zfp420	99	56.115	MGP_C3HHeJ_G0032730	Zfp768	51	56.071
MGP_C3HHeJ_G0031693	Zfp420	97	48.106	MGP_C3HHeJ_G0032733	-	81	48.106
MGP_C3HHeJ_G0031693	Zfp420	98	56.275	MGP_C3HHeJ_G0020445	Rslcan18	71	56.275
MGP_C3HHeJ_G0031693	Zfp420	99	51.196	MGP_C3HHeJ_G0020446	Zfp759	88	50.364
MGP_C3HHeJ_G0031693	Zfp420	98	48.744	MGP_C3HHeJ_G0029207	Zbtb49	89	50.000
MGP_C3HHeJ_G0031693	Zfp420	98	50.000	MGP_C3HHeJ_G0033454	Zfp882	85	50.000
MGP_C3HHeJ_G0031693	Zfp420	98	52.151	MGP_C3HHeJ_G0018152	Zfp867	82	52.151
MGP_C3HHeJ_G0031693	Zfp420	97	41.080	MGP_C3HHeJ_G0022983	Zscan10	78	40.179
MGP_C3HHeJ_G0031693	Zfp420	95	30.691	MGP_C3HHeJ_G0031280	-	66	31.343
MGP_C3HHeJ_G0031693	Zfp420	97	44.706	MGP_C3HHeJ_G0028746	Zbtb17	69	44.706
MGP_C3HHeJ_G0031693	Zfp420	99	60.656	MGP_C3HHeJ_G0021752	Zfp251	78	60.656
MGP_C3HHeJ_G0031693	Zfp420	97	49.194	MGP_C3HHeJ_G0029542	Gfi1	100	48.507
MGP_C3HHeJ_G0031693	Zfp420	99	51.825	MGP_C3HHeJ_G0031632	Zfp974	92	51.825
MGP_C3HHeJ_G0031693	Zfp420	98	55.210	MGP_C3HHeJ_G0022955	Zfp51	88	55.210
MGP_C3HHeJ_G0031693	Zfp420	98	54.648	MGP_C3HHeJ_G0022953	Zfp677	89	54.648
MGP_C3HHeJ_G0031693	Zfp420	98	46.711	MGP_C3HHeJ_G0030394	Repin1	93	46.711
MGP_C3HHeJ_G0031693	Zfp420	98	59.532	MGP_C3HHeJ_G0018006	Zfp454	71	57.803
MGP_C3HHeJ_G0031693	Zfp420	99	54.233	MGP_C3HHeJ_G0034162	Zfp872	86	53.608
MGP_C3HHeJ_G0031693	Zfp420	99	57.095	MGP_C3HHeJ_G0031528	Zfp94	78	57.095
MGP_C3HHeJ_G0031693	Zfp420	99	55.310	MGP_C3HHeJ_G0031527	Zfp61	59	55.310
MGP_C3HHeJ_G0031693	Zfp420	99	55.556	MGP_C3HHeJ_G0031526	Zfp108	79	55.556
MGP_C3HHeJ_G0031693	Zfp420	99	53.722	MGP_C3HHeJ_G0031521	Zfp112	59	53.722
MGP_C3HHeJ_G0031693	Zfp420	99	56.553	MGP_C3HHeJ_G0031522	Zfp235	72	56.553
MGP_C3HHeJ_G0031693	Zfp420	98	49.524	MGP_C3HHeJ_G0018101	Zfp672	89	49.524
MGP_C3HHeJ_G0031693	Zfp420	99	52.489	MGP_C3HHeJ_G0026610	Zfp334	75	51.716
MGP_C3HHeJ_G0031693	Zfp420	98	56.182	MGP_C3HHeJ_G0020463	Zfp748	92	56.182
MGP_C3HHeJ_G0031693	Zfp420	99	47.059	MGP_C3HHeJ_G0024336	Zfp236	79	47.059
MGP_C3HHeJ_G0031693	Zfp420	99	57.692	MGP_C3HHeJ_G0033828	Zfp1	78	57.692
MGP_C3HHeJ_G0031693	Zfp420	99	60.047	MGP_C3HHeJ_G0031815	-	71	60.047
MGP_C3HHeJ_G0031693	Zfp420	98	47.967	MGP_C3HHeJ_G0032732	E430018J23Rik	67	47.967
MGP_C3HHeJ_G0031693	Zfp420	99	37.634	MGP_C3HHeJ_G0031279	Zfp865	80	37.634