EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_C3HHeJ_G0031781 (Gene tree)
Gene ID
-
Gene Symbol
Lsm14a
Alias
2700023B17Rik|AA407828|AU017544|Fam61a|Rap55a|Tral
Full Name
LSM14A mRNA processing body assembly factor
Gene Type
protein_coding
Species
Mus_musculus_c3hhej
Status
putative
Strand
Minus strand
Length
59475 bases
Position
chr7:34444926-34504400
Accession
1914320
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_C3HHeJ_P0082840FDFPF09532.104.4e-3111
MGP_C3HHeJ_P0082841FDFPF09532.103.9e-1311
MGP_C3HHeJ_P0082845FDFPF09532.102.4e-1211
MGP_C3HHeJ_P0082845SM-ATXPF14438.67.1e-0811
MGP_C3HHeJ_P0082840SM-ATXPF14438.61.6e-0711
MGP_C3HHeJ_P0082845LSM14PF12701.71.2e-3311
MGP_C3HHeJ_P0082840LSM14PF12701.73.4e-3311
MGP_C3HHeJ_P0082846LSM14PF12701.72.1e-1411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_C3HHeJ_T0082846-821-MGP_C3HHeJ_P0082846175 (aa)--
MGP_C3HHeJ_T0082847-2580--- (aa)--
MGP_C3HHeJ_T0082844-889--- (aa)--
MGP_C3HHeJ_T0082845-864-MGP_C3HHeJ_P0082845287 (aa)--
MGP_C3HHeJ_T0082842-1598-MGP_C3HHeJ_P008284272 (aa)--
MGP_C3HHeJ_T0082843-647-MGP_C3HHeJ_P0082843157 (aa)--
MGP_C3HHeJ_T0082840-2944XM_006540299MGP_C3HHeJ_P0082840462 (aa)XP_006540362Q8K2F8
MGP_C3HHeJ_T0082841-1646-MGP_C3HHeJ_P0082841123 (aa)--
Gene Model
Click here to download MGP_C3HHeJ_G0031781's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0031781's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_C3HHeJ_G0031781Lsm14a9455.088MGP_C3HHeJ_G0026698Lsm14b9649.231

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us