EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0032214 (Gene tree)
Gene ID: -
Gene Symbol: Rab30
Alias: 5033421K01Rik|AI323892|Rsb30
Full Name: RAB30%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Plus strand
Length: 100818 bases
Position: chr7:95505714-95606531
Accession: 1923235
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0084591	MMR_HSR1	PF01926.23	2.3e-05	1	1
MGP_C3HHeJ_P0084592	MMR_HSR1	PF01926.23	2.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0084592	-	1406	-	MGP_C3HHeJ_P0084592	203 (aa)	-	-
MGP_C3HHeJ_T0084593	-	1304	-	MGP_C3HHeJ_P0084593	175 (aa)	-	-
MGP_C3HHeJ_T0084591	-	2039	XM_006508293	MGP_C3HHeJ_P0084591	203 (aa)	XP_006508356	Q923S9

Gene Model

Click here to download MGP_C3HHeJ_G0032214's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0032214's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0032214	Rab30	76	42.857	MGP_C3HHeJ_G0023702	Rab31	79	42.857
MGP_C3HHeJ_G0032214	Rab30	80	48.466	MGP_C3HHeJ_G0019120	Rab37	75	48.466
MGP_C3HHeJ_G0032214	Rab30	81	33.735	MGP_C3HHeJ_G0034853	Mras	79	33.735
MGP_C3HHeJ_G0032214	Rab30	88	47.778	MGP_C3HHeJ_G0023711	Rab12	62	47.778
MGP_C3HHeJ_G0032214	Rab30	86	50.286	MGP_C3HHeJ_G0029670	Rab35	86	50.286
MGP_C3HHeJ_G0032214	Rab30	79	34.756	MGP_C3HHeJ_G0021976	Rabl2	70	34.756
MGP_C3HHeJ_G0032214	Rab30	79	39.157	MGP_C3HHeJ_G0035785	Rab9b	82	39.157
MGP_C3HHeJ_G0032214	Rab30	82	50.602	MGP_C3HHeJ_G0017819	Rab1a	81	50.602
MGP_C3HHeJ_G0032214	Rab30	86	42.529	MGP_C3HHeJ_G0019609	Rab15	82	42.529
MGP_C3HHeJ_G0032214	Rab30	83	42.857	MGP_C3HHeJ_G0017639	Rab5b	78	42.857
MGP_C3HHeJ_G0032214	Rab30	81	32.317	MGP_C3HHeJ_G0031289	Rasl2-9	75	32.317
MGP_C3HHeJ_G0032214	Rab30	97	39.524	MGP_C3HHeJ_G0023261	Rab11b	96	39.524
MGP_C3HHeJ_G0032214	Rab30	83	47.929	MGP_C3HHeJ_G0023860	Rab18	82	47.929
MGP_C3HHeJ_G0032214	Rab30	82	50.000	MGP_C3HHeJ_G0024427	Rab1b	83	50.000
MGP_C3HHeJ_G0032214	Rab30	84	34.503	MGP_C3HHeJ_G0027390	Nras	96	34.932
MGP_C3HHeJ_G0032214	Rab30	97	37.981	MGP_C3HHeJ_G0034626	Rab11a	91	44.604
MGP_C3HHeJ_G0032214	Rab30	87	33.146	MGP_C3HHeJ_G0031183	Kras	93	33.146
MGP_C3HHeJ_G0032214	Rab30	80	42.331	MGP_C3HHeJ_G0026677	Rab22a	84	42.331
MGP_C3HHeJ_G0032214	Rab30	79	42.857	MGP_C3HHeJ_G0032274	Rab6a	77	42.857
MGP_C3HHeJ_G0032214	Rab30	89	40.556	MGP_C3HHeJ_G0025384	Rab14	91	43.478
MGP_C3HHeJ_G0032214	Rab30	86	43.678	MGP_C3HHeJ_G0023612	Rab5a	81	43.678
MGP_C3HHeJ_G0032214	Rab30	89	34.426	MGP_C3HHeJ_G0032911	Hras	94	34.426
MGP_C3HHeJ_G0032214	Rab30	79	41.615	MGP_C3HHeJ_G0034876	Rab6b	77	41.615
MGP_C3HHeJ_G0032214	Rab30	81	47.059	MGP_C3HHeJ_G0026913	Rab33b	74	47.059
MGP_C3HHeJ_G0032214	Rab30	81	51.176	MGP_C3HHeJ_G0035367	Rab33a	72	51.176
MGP_C3HHeJ_G0032214	Rab30	78	38.272	MGP_C3HHeJ_G0017111	Rab36	61	38.272
MGP_C3HHeJ_G0032214	Rab30	77	35.625	MGP_C3HHeJ_G0018521	Rab34	62	35.625
MGP_C3HHeJ_G0032214	Rab30	87	37.500	MGP_C3HHeJ_G0015674	Rab23	74	37.500
MGP_C3HHeJ_G0032214	Rab30	78	48.447	MGP_C3HHeJ_G0035541	Rab39b	76	48.447
MGP_C3HHeJ_G0032214	Rab30	90	42.391	MGP_C3HHeJ_G0027739	Rab2a	87	42.391
MGP_C3HHeJ_G0032214	Rab30	84	45.614	MGP_C3HHeJ_G0021035	Rab2b	81	48.718
MGP_C3HHeJ_G0032214	Rab30	83	42.012	MGP_C3HHeJ_G0018918	Rab5c	78	42.012
MGP_C3HHeJ_G0032214	Rab30	82	31.737	MGP_C3HHeJ_G0029053	Rheb	88	31.737
MGP_C3HHeJ_G0032214	Rab30	95	38.889	MGP_C3HHeJ_G0035937	Rab9	97	38.889
MGP_C3HHeJ_G0032214	Rab30	78	40.854	MGP_C3HHeJ_G0030726	Rab7	92	42.222
MGP_C3HHeJ_G0032214	Rab30	97	41.546	MGP_C3HHeJ_G0027115	Rab25	96	41.546