EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0032657 (Gene tree)
Gene ID: -
Gene Symbol: Tnrc6a
Alias: 2010321I05Rik|3110054G10Rik|AW557223|CAGH26|D130023A07Rik|GW182|Tnrc6
Full Name: trinucleotide repeat containing 6a
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Plus strand
Length: 89095 bases
Position: chr7:127000314-127089408
Accession: 2385292
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0085938	Ago_hook	PF10427.9	3.4e-19	1	1
MGP_C3HHeJ_P0085935	Ago_hook	PF10427.9	6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0085941	-	606	-	-	- (aa)	-	-
MGP_C3HHeJ_T0085939	-	4312	-	-	- (aa)	-	-
MGP_C3HHeJ_T0085938	-	5227	-	MGP_C3HHeJ_P0085938	1397 (aa)	-	-
MGP_C3HHeJ_T0085937	-	1783	-	-	- (aa)	-	-
MGP_C3HHeJ_T0085936	-	3577	-	MGP_C3HHeJ_P0085936	35 (aa)	-	-
MGP_C3HHeJ_T0085935	-	8144	-	MGP_C3HHeJ_P0085935	1880 (aa)	-	-
MGP_C3HHeJ_T0085934	-	310	-	MGP_C3HHeJ_P0085934	53 (aa)	-	-
MGP_C3HHeJ_T0085933	-	640	-	-	- (aa)	-	-
MGP_C3HHeJ_T0085942	-	463	-	MGP_C3HHeJ_P0085942	154 (aa)	-	-
MGP_C3HHeJ_T0085943	-	3297	-	-	- (aa)	-	-
MGP_C3HHeJ_T0085940	-	939	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C3HHeJ_G0032657's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0032657's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0032657	Tnrc6a	98	44.685	MGP_C3HHeJ_G0019197	Tnrc6c	99	40.570
MGP_C3HHeJ_G0032657	Tnrc6a	99	39.671	MGP_C3HHeJ_G0021841	Tnrc6b	98	37.120