EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0032724 (Gene tree)
Gene ID: -
Gene Symbol: Sept1
Alias: Diff6|PNUTL3|Pnutl3
Full Name: septin 1
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Minus strand
Length: 20100 bases
Position: chr7:131232422-131252521
Accession: 1858916
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0086344	MMR_HSR1	PF01926.23	2e-08	1	1
MGP_C3HHeJ_P0086343	MMR_HSR1	PF01926.23	3.5e-08	1	1
MGP_C3HHeJ_P0086341	MMR_HSR1	PF01926.23	5.1e-08	1	1
MGP_C3HHeJ_P0086340	MMR_HSR1	PF01926.23	5.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0086341	-	1048	-	MGP_C3HHeJ_P0086341	328 (aa)	-	-
MGP_C3HHeJ_T0086340	-	1101	-	MGP_C3HHeJ_P0086340	366 (aa)	-	-
MGP_C3HHeJ_T0086343	-	706	-	MGP_C3HHeJ_P0086343	186 (aa)	-	-
MGP_C3HHeJ_T0086342	-	789	-	-	- (aa)	-	-
MGP_C3HHeJ_T0086345	-	821	-	-	- (aa)	-	-
MGP_C3HHeJ_T0086344	-	599	-	MGP_C3HHeJ_P0086344	145 (aa)	-	-
MGP_C3HHeJ_T0086347	-	713	-	-	- (aa)	-	-
MGP_C3HHeJ_T0086346	-	242	-	-	- (aa)	-	-
MGP_C3HHeJ_T0086339	-	571	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C3HHeJ_G0032724's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0032724's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0032724	Sept1	100	47.260	MGP_C3HHeJ_G0022213	Sept12	77	43.775
MGP_C3HHeJ_G0032724	Sept1	100	64.828	MGP_C3HHeJ_G0016109	Sept2	100	60.748
MGP_C3HHeJ_G0032724	Sept1	100	59.310	MGP_C3HHeJ_G0034178	Sept7	76	49.709
MGP_C3HHeJ_G0032724	Sept1	100	66.897	MGP_C3HHeJ_G0018660	Sept4	99	64.516
MGP_C3HHeJ_G0032724	Sept1	100	40.816	MGP_C3HHeJ_G0029457	Sept11	76	40.762
MGP_C3HHeJ_G0032724	Sept1	100	43.537	MGP_C3HHeJ_G0017014	Sept10	71	40.064
MGP_C3HHeJ_G0032724	Sept1	100	68.276	MGP_C3HHeJ_G0022349	Sept5	93	63.068
MGP_C3HHeJ_G0032724	Sept1	100	50.685	MGP_C3HHeJ_G0021877	Sept3	86	46.575
MGP_C3HHeJ_G0032724	Sept1	100	38.095	MGP_C3HHeJ_G0018049	Sept8	76	36.765
MGP_C3HHeJ_G0032724	Sept1	100	50.000	MGP_C3HHeJ_G0019195	Sept9	83	46.000
MGP_C3HHeJ_G0032724	Sept1	100	40.136	MGP_C3HHeJ_G0035316	Sept6	76	41.349